DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRHGLPGVG
Uniprot ID:
P21817
Source protein:
Ryanodine receptor 1
Source gene:
RYR1
Class:
DEG_APCC_DBOX_1
Location:
1758:1766
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.976
ASA_SCORE:
56.7778
COIL:
0.7443
CONS_SCORE:
0.3955
DSS_SCORE:
0.6283
HELIX:
0.0487
FCONS_SCORE:
1.1321
RIG_SCORE:
0.6114
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1759L
TCGA-60-2714
LUSC
TCGA
PRHGLPGVG
DEG_APCC_DBOX_1
0.8428
p.R1759L
DO26530
LUSC
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.8428
p.R1759Q
TCGA-VQ-A8PT
STAD
TCGA
PRHGLPGVG
DEG_APCC_DBOX_1
0.7329
p.R1759Q
DO51776
STAD
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.7329
p.V1765A
SIDM01146
Gastric Carcinoma
GDSC
PRHGLPGVG
DEG_APCC_DBOX_1
0.6936
p.V1765A
ACH-000932
Gastric Cancer
CCLE
PRHGLPGVG
DEG_APCC_DBOX_1
0.6936
p.V1765A
NCI-SNU-1
stomach
COSMIC
PRHGLPGVG
DEG_APCC_DBOX_1
0.6936
p.G1766A
DO48431
BLCA
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.6429
p.H1760N
TCGA-64-1676
LUAD
TCGA
PRHGLPGVG
DEG_APCC_DBOX_1
0.6312
p.H1760N
DO23629
LUAD
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.6312
p.P1763S
SIDM01175
Other Sarcomas
GDSC
PRHGLPGVG
DEG_APCC_DBOX_1
0.5641
p.P1763S
SW684
soft_tissue
COSMIC
PRHGLPGVG
DEG_APCC_DBOX_1
0.5641
p.T1768I
TCGA-85-8288
LUSC
TCGA
PRHGLPGVG
DEG_APCC_DBOX_1
0.2778
p.T1768I
DO26963
LUSC
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.2778
p.T1769N
DO231495
THCA
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.25
p.S1770L
TCGA-BQ-7058
KIRP
TCGA
PRHGLPGVG
DEG_APCC_DBOX_1
0.2222
p.S1770L
TCGA-GC-A6I3
BLCA
TCGA
PRHGLPGVG
DEG_APCC_DBOX_1
0.2222
p.S1770L
DO219025
BLCA
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.2222
p.S1770L
DO20788
KIRP
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.2222
p.S1770L
SIDM01145
Gastric Carcinoma
GDSC
PRHGLPGVG
DEG_APCC_DBOX_1
0.2222
p.S1770L
ACH-000581
Gastric Cancer
CCLE
PRHGLPGVG
DEG_APCC_DBOX_1
0.2222
p.S1770L
NCI-SNU-16
stomach
COSMIC
PRHGLPGVG
DEG_APCC_DBOX_1
0.2222
p.P1773S
DO229016
COCA
ICGC
PRHGLPGVG
DEG_APCC_DBOX_1
0.1389
p.P1773S
SIDM00425
Ovarian Carcinoma
GDSC
PRHGLPGVG
DEG_APCC_DBOX_1
0.1389
p.P1773S
SIDM01199
Hepatocellular Carcinoma
GDSC
PRHGLPGVG
DEG_APCC_DBOX_1
0.1389
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Drug responses associated with RYR1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PRHGLPGVG
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P21817
Ryanodine receptor 1
DEG_APCC_DBOX_1
1758:1766
PRHGLPGVG
APC,CDC20,FZR1
0.976
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