DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRHTPTKS
Uniprot ID:
Q9BX26
Source protein:
Synaptonemal complex protein 2
Source gene:
SYCP2
Class:
DEG_SCF_FBW7_1
Location:
1186:1193
E3 ligase:
FBXW7
DEGRON score:
0.9813
ASA_SCORE:
116.65
COIL:
0.9609
CONS_SCORE:
0.3239
DSS_SCORE:
0.4903
HELIX:
0.0169
FCONS_SCORE:
0.9335
RIG_SCORE:
0.7031
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1199K
TCGA-AP-A059
UCEC
TCGA
PRHTPTKS
DEG_SCF_FBW7_1
0.1667
p.R1199K
DO41361
UCEC
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.1667
p.P1180L
TCGA-BR-6458
STAD
TCGA
PRHTPTKS
DEG_SCF_FBW7_1
0.1667
p.P1180L
DO38296
STAD
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.1667
p.R1181Q
TCGA-C8-A26X
BRCA
TCGA
PRHTPTKS
DEG_SCF_FBW7_1
0.1944
p.R1181Q
DO5549
BRCA
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.1944
p.R1199T
TCGA-E2-A14V
BRCA
TCGA
PRHTPTKS
DEG_SCF_FBW7_1
0.1667
p.R1199T
DO3548
BRCA
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.1667
p.P1182S
TCGA-N8-A4PI
UCS
TCGA
PRHTPTKS
DEG_SCF_FBW7_1
0.2222
p.P1182T
DO228948
LICA
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.2222
p.P1182T
DO229027
LICA
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.2222
p.P1182T
DO229026
LICA
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.2222
p.S1177L
DO231212
LUSC
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.0833
p.K1200Q
DO222363
MELA
ICGC
PRHTPTKS
DEG_SCF_FBW7_1
0.25
p.K1200E
SIDM00356
Non-Small Cell Lung Carcinoma
GDSC
PRHTPTKS
DEG_SCF_FBW7_1
0.25
p.P1190L
SIDM00974
Melanoma
GDSC
PRHTPTKS
DEG_SCF_FBW7_1
0.7582
p.P1190L
ACH-002207
Skin Cancer
CCLE
PRHTPTKS
DEG_SCF_FBW7_1
0.7582
p.P1190L
WM35
skin
COSMIC
PRHTPTKS
DEG_SCF_FBW7_1
0.7582
Drug responses associated with SYCP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRHTPTKS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BX26
Synaptonemal complex protein 2
DEG_SCF_FBW7_1
1186:1193
PRHTPTKS
FBXW7
0.9813
More...