DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRKNLWGIK
Uniprot ID:
Q9UHL0
Source protein:
ATP-dependent RNA helicase DDX25
Source gene:
DDX25
Class:
DEG_APCC_DBOX_1
Location:
28:36
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.651
ASA_SCORE:
94.3556
COIL:
0.7946
CONS_SCORE:
0.2558
DSS_SCORE:
0.3298
HELIX:
0.1288
FCONS_SCORE:
1.0707
RIG_SCORE:
0.7447
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N24D
TCGA-AD-6964
COAD
TCGA
PRKNLWGIK
DEG_APCC_DBOX_1
0.2222
p.N24D
DO8360
COAD
ICGC
PRKNLWGIK
DEG_APCC_DBOX_1
0.2222
p.R41Q
TCGA-D1-A167
UCEC
TCGA
PRKNLWGIK
DEG_APCC_DBOX_1
0.1944
p.R41Q
DO40978
UCEC
ICGC
PRKNLWGIK
DEG_APCC_DBOX_1
0.1944
p.V40D
DO9042
COAD
ICGC
PRKNLWGIK
DEG_APCC_DBOX_1
0.2222
p.G45A
DO224761
COCA
ICGC
PRKNLWGIK
DEG_APCC_DBOX_1
0.0833
p.K36N
DO229027
LICA
ICGC
PRKNLWGIK
DEG_APCC_DBOX_1
0.5806
p.S46F
SIDM00584
Osteosarcoma
GDSC
PRKNLWGIK
DEG_APCC_DBOX_1
0.0556
p.S37R
SIDM00653
Small Cell Lung Carcinoma
GDSC
PRKNLWGIK
DEG_APCC_DBOX_1
0.3056
p.S37R
ACH-000514
Lung Cancer
CCLE
PRKNLWGIK
DEG_APCC_DBOX_1
0.3056
p.S37R
NCI-H1092
lung
COSMIC
PRKNLWGIK
DEG_APCC_DBOX_1
0.3056
Drug responses associated with DDX25 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRKNLWGIK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UHL0
ATP-dependent RNA helicase DDX25
DEG_APCC_DBOX_1
28:36
PRKNLWGIK
APC,CDC20,FZR1
0.651
More...