DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRKVLFHLR
Uniprot ID:
Q64LD2
Source protein:
WD repeat-containing protein 25
Source gene:
WDR25
Class:
DEG_APCC_DBOX_1
Location:
235:243
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6414
ASA_SCORE:
70.8111
COIL:
0.3538
CONS_SCORE:
0.5406
DSS_SCORE:
0.2988
HELIX:
0.0103
FCONS_SCORE:
0.9516
RIG_SCORE:
0.845
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G244C
TCGA-06-5416
GBM
TCGA
PRKVLFHLR
DEG_APCC_DBOX_1
0.3056
p.G244C
DO10880
GBM
ICGC
PRKVLFHLR
DEG_APCC_DBOX_1
0.3056
p.R236Q
TCGA-A5-A0G2
UCEC
TCGA
PRKVLFHLR
DEG_APCC_DBOX_1
0.7329
p.R236Q
DO41235
UCEC
ICGC
PRKVLFHLR
DEG_APCC_DBOX_1
0.7329
p.Y229H
TCGA-AR-A2LL
BRCA
TCGA
PRKVLFHLR
DEG_APCC_DBOX_1
0.1667
p.Y229H
DO1702
BRCA
ICGC
PRKVLFHLR
DEG_APCC_DBOX_1
0.1667
p.L242P
TCGA-AX-A2IN
UCEC
TCGA
PRKVLFHLR
DEG_APCC_DBOX_1
0.7582
p.L242P
DO42328
UCEC
ICGC
PRKVLFHLR
DEG_APCC_DBOX_1
0.7582
p.F240L
TCGA-CV-7427
HNSC
TCGA
PRKVLFHLR
DEG_APCC_DBOX_1
0.587
p.F240L
DO14286
HNSC
ICGC
PRKVLFHLR
DEG_APCC_DBOX_1
0.587
p.H241Y
TCGA-D3-A8GL
SKCM
TCGA
PRKVLFHLR
DEG_APCC_DBOX_1
0.6118
p.H241Y
DO50287
SKCM
ICGC
PRKVLFHLR
DEG_APCC_DBOX_1
0.6118
p.P248T
TCGA-DZ-6133
KIRP
TCGA
PRKVLFHLR
DEG_APCC_DBOX_1
0.1944
p.P248T
DO20762
KIRP
ICGC
PRKVLFHLR
DEG_APCC_DBOX_1
0.1944
p.T251I
SIDM00328
Esophageal Squamous Cell Carcinoma
GDSC
PRKVLFHLR
DEG_APCC_DBOX_1
0.1111
p.T251I
ACH-000605
Esophageal Cancer
CCLE
PRKVLFHLR
DEG_APCC_DBOX_1
0.1111
p.T251I
TE-6
oesophagus
COSMIC
PRKVLFHLR
DEG_APCC_DBOX_1
0.1111
p.P248S
SIDM00839
Colorectal Carcinoma
GDSC
PRKVLFHLR
DEG_APCC_DBOX_1
0.1944
p.P248S
ACH-000950
Colon/Colorectal Cancer
CCLE
PRKVLFHLR
DEG_APCC_DBOX_1
0.1944
p.P248S
LoVo
large_intestine
COSMIC
PRKVLFHLR
DEG_APCC_DBOX_1
0.1944
p.D237N
Mewo
skin
COSMIC
PRKVLFHLR
DEG_APCC_DBOX_1
0.6932
p.S225F
KYSE-180
oesophagus
COSMIC
PRKVLFHLR
DEG_APCC_DBOX_1
0.0556
p.R239W
CPC-N
lung
COSMIC
PRKVLFHLR
DEG_APCC_DBOX_1
0.8634
Drug responses associated with WDR25 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRKVLFHLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q64LD2
WD repeat-containing protein 25
DEG_APCC_DBOX_1
235:243
PRKVLFHLR
APC,CDC20,FZR1
0.6414
More...