DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRKYLNILP
Uniprot ID:
Q6PJI9
Source protein:
GATOR complex protein WDR59
Source gene:
WDR59
Class:
DEG_APCC_DBOX_1
Location:
224:232
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6472
ASA_SCORE:
73.0556
COIL:
0.4036
CONS_SCORE:
0.4322
DSS_SCORE:
0.0825
HELIX:
0.0258
FCONS_SCORE:
0.6778
RIG_SCORE:
0.8785
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F218L
TCGA-06-5416
GBM
TCGA
PRKYLNILP
DEG_APCC_DBOX_1
0.1667
p.F218L
DO10880
GBM
ICGC
PRKYLNILP
DEG_APCC_DBOX_1
0.1667
p.W219C
TCGA-D3-A2J6
SKCM
TCGA
PRKYLNILP
DEG_APCC_DBOX_1
0.1944
p.W219C
DO37901
SKCM
ICGC
PRKYLNILP
DEG_APCC_DBOX_1
0.1944
p.P236L
TCGA-ER-A19M
SKCM
TCGA
PRKYLNILP
DEG_APCC_DBOX_1
0.2222
p.P236L
DO37798
SKCM
ICGC
PRKYLNILP
DEG_APCC_DBOX_1
0.2222
p.S215Y
DO229019
LICA
ICGC
PRKYLNILP
DEG_APCC_DBOX_1
0.0833
p.R225W
SIDM00216
Colorectal Carcinoma
GDSC
PRKYLNILP
DEG_APCC_DBOX_1
0.8634
p.R225W
ACH-000989
Colon/Colorectal Cancer
CCLE
PRKYLNILP
DEG_APCC_DBOX_1
0.8634
p.R225W
SNU-175
large_intestine
COSMIC
PRKYLNILP
DEG_APCC_DBOX_1
0.8634
p.P232S
SIDM00336
Melanoma
GDSC
PRKYLNILP
DEG_APCC_DBOX_1
0.5641
p.P232S
ACH-000881
Skin Cancer
CCLE
PRKYLNILP
DEG_APCC_DBOX_1
0.5641
p.P232S
MEL-JUSO
skin
COSMIC
PRKYLNILP
DEG_APCC_DBOX_1
0.5641
p.N229S
SIDM00869
Non-Cancerous
GDSC
PRKYLNILP
DEG_APCC_DBOX_1
0.5958
p.N229S
SIDM00538
Esophageal Carcinoma
GDSC
PRKYLNILP
DEG_APCC_DBOX_1
0.5958
p.N229S
SIDM00621
Ewing's Sarcoma
GDSC
PRKYLNILP
DEG_APCC_DBOX_1
0.5958
p.R222H
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PRKYLNILP
DEG_APCC_DBOX_1
0.2778
p.R222H
ACH-001127
Leukemia
CCLE
PRKYLNILP
DEG_APCC_DBOX_1
0.2778
p.R222H
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PRKYLNILP
DEG_APCC_DBOX_1
0.2778
p.L242V
NCI-H2196
lung
COSMIC
PRKYLNILP
DEG_APCC_DBOX_1
0.0556
Drug responses associated with WDR59 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRKYLNILP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PJI9
GATOR complex protein WDR59
DEG_APCC_DBOX_1
224:232
PRKYLNILP
APC,CDC20,FZR1
0.6472
More...