DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRLGLLALA
Uniprot ID:
Q8WUA4
Source protein:
General transcription factor 3C polypeptide 2
Source gene:
GTF3C2
Class:
DEG_APCC_DBOX_1
Location:
494:502
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7457
ASA_SCORE:
11.2556
COIL:
0.1463
CONS_SCORE:
0.7013
DSS_SCORE:
0.0799
HELIX:
0.0111
FCONS_SCORE:
1.4302
RIG_SCORE:
0.8397
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P487S
TCGA-D9-A1JW
SKCM
TCGA
PRLGLLALA
DEG_APCC_DBOX_1
0.1389
p.P487S
DO37786
SKCM
ICGC
PRLGLLALA
DEG_APCC_DBOX_1
0.1389
p.R488Q
SIDM00477
Esophageal Carcinoma
GDSC
PRLGLLALA
DEG_APCC_DBOX_1
0.1667
p.R488Q
ACH-000383
Esophageal Cancer
CCLE
PRLGLLALA
DEG_APCC_DBOX_1
0.1667
p.K507E
SIDM00383
Gastric Carcinoma
GDSC
PRLGLLALA
DEG_APCC_DBOX_1
0.3056
p.K507E
ACH-002198
Gastric Cancer
CCLE
PRLGLLALA
DEG_APCC_DBOX_1
0.3056
p.K507E
SCH
stomach
COSMIC
PRLGLLALA
DEG_APCC_DBOX_1
0.3056
p.P491L
ACH-000246
Kidney Cancer
CCLE
PRLGLLALA
DEG_APCC_DBOX_1
0.25
p.T486S
ACH-001841
Bile Duct Cancer
CCLE
PRLGLLALA
DEG_APCC_DBOX_1
0.5556
Drug responses associated with GTF3C2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRLGLLALA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WUA4
General transcription factor 3C polypeptide 2
DEG_APCC_DBOX_1
494:502
PRLGLLALA
APC,CDC20,FZR1
0.7457
More...