DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRLLLLSLL
Uniprot ID:
Q99805
Source protein:
Transmembrane 9 superfamily member 2
Source gene:
TM9SF2
Class:
DEG_APCC_DBOX_1
Location:
14:22
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9137
ASA_SCORE:
74.8444
COIL:
0.1443
CONS_SCORE:
0.401
DSS_SCORE:
0.0171
HELIX:
0.8426
FCONS_SCORE:
1.8056
RIG_SCORE:
0.9158
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S9Y
TCGA-BK-A6W3
UCEC
TCGA
PRLLLLSLL
DEG_APCC_DBOX_1
0.1944
p.S9Y
DO50076
UCEC
ICGC
PRLLLLSLL
DEG_APCC_DBOX_1
0.1944
p.R31H
TCGA-TS-A8AI
MESO
TCGA
PRLLLLSLL
DEG_APCC_DBOX_1
0.0833
p.S20L
DO50410
ESAD
ICGC
PRLLLLSLL
DEG_APCC_DBOX_1
0.7667
p.L17S
DO44664
LICA
ICGC
PRLLLLSLL
DEG_APCC_DBOX_1
0.6556
p.V7M
SIDM01609
Endometrial Carcinoma
GDSC
PRLLLLSLL
DEG_APCC_DBOX_1
0.1389
p.V7M
ACH-000972
Endometrial/Uterine Cancer
CCLE
PRLLLLSLL
DEG_APCC_DBOX_1
0.1389
Drug responses associated with TM9SF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRLLLLSLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99805
Transmembrane 9 superfamily member 2
DEG_APCC_DBOX_1
14:22
PRLLLLSLL
APC,CDC20,FZR1
0.9137
More...