DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRPGLKKLS
Uniprot ID:
Q8IXR9
Source protein:
Uncharacterized protein C12orf56
Source gene:
C12orf56
Class:
DEG_APCC_DBOX_1
Location:
179:187
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8776
ASA_SCORE:
83.9333
COIL:
0.7804
CONS_SCORE:
0.4171
DSS_SCORE:
0.6622
HELIX:
0.1218
FCONS_SCORE:
1.0646
RIG_SCORE:
0.6637
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R180C
DO220880
MELA
ICGC
PRPGLKKLS
DEG_APCC_DBOX_1
0.8301
p.S184Y
TCGA-AN-A046
BRCA
TCGA
PRPGLKKLS
DEG_APCC_DBOX_1
0.712
p.S184Y
TCGA-FI-A2D5
UCEC
TCGA
PRPGLKKLS
DEG_APCC_DBOX_1
0.712
p.S190Y
TCGA-AP-A056
UCEC
TCGA
PRPGLKKLS
DEG_APCC_DBOX_1
0.25
p.G190S
DO220902
MELA
ICGC
PRPGLKKLS
DEG_APCC_DBOX_1
0.25
p.G190S
DO47255
SKCM
ICGC
PRPGLKKLS
DEG_APCC_DBOX_1
0.25
p.Q191K
DO228948
LICA
ICGC
PRPGLKKLS
DEG_APCC_DBOX_1
0.2222
p.G192V
SIDM00068
Colorectal Carcinoma
GDSC
PRPGLKKLS
DEG_APCC_DBOX_1
0.1944
p.K196T
TCGA-VS-A8QH
CESC
TCGA
PRPGLKKLS
DEG_APCC_DBOX_1
0.0833
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Drug responses associated with C12orf56 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PRPGLKKLS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXR9
Uncharacterized protein C12orf56
DEG_APCC_DBOX_1
179:187
PRPGLKKLS
APC,CDC20,FZR1
0.8776
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