DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRPSLAKLS
Uniprot ID:
Q8NDG6
Source protein:
ATP-dependent RNA helicase TDRD9
Source gene:
TDRD9
Class:
DEG_APCC_DBOX_1
Location:
109:117
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7231
ASA_SCORE:
83.3222
COIL:
0.735
CONS_SCORE:
0.3691
DSS_SCORE:
0.49
HELIX:
0.2312
FCONS_SCORE:
0.9541
RIG_SCORE:
0.6723
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T126P
TCGA-B5-A1MR
UCEC
TCGA
PRPSLAKLS
DEG_APCC_DBOX_1
0.0833
p.T126P
DO41758
UCEC
ICGC
PRPSLAKLS
DEG_APCC_DBOX_1
0.0833
p.R110W
TCGA-EO-A22X
UCEC
TCGA
PRPSLAKLS
DEG_APCC_DBOX_1
0.8634
p.R110W
DO43907
UCEC
ICGC
PRPSLAKLS
DEG_APCC_DBOX_1
0.8634
p.P109L
DO50970
LICA
ICGC
PRPSLAKLS
DEG_APCC_DBOX_1
0.6471
p.S117R
DO232835
NACA
ICGC
PRPSLAKLS
DEG_APCC_DBOX_1
0.7427
p.T125A
DO232852
NACA
ICGC
PRPSLAKLS
DEG_APCC_DBOX_1
0.1111
p.P103S
DO229224
THCA
ICGC
PRPSLAKLS
DEG_APCC_DBOX_1
0.1667
p.P111Q
DO229240
THCA
ICGC
PRPSLAKLS
DEG_APCC_DBOX_1
0.5924
p.P111L
SIDM01117
Small Cell Lung Carcinoma
GDSC
PRPSLAKLS
DEG_APCC_DBOX_1
0.6471
p.S105N
SIDM00120
Prostate Carcinoma
GDSC
PRPSLAKLS
DEG_APCC_DBOX_1
0.2222
p.S105N
ACH-000979
Prostate Cancer
CCLE
PRPSLAKLS
DEG_APCC_DBOX_1
0.2222
p.S105N
DU-145
prostate
COSMIC
PRPSLAKLS
DEG_APCC_DBOX_1
0.2222
p.P123Q
SIDM00656
Burkitt's Lymphoma
GDSC
PRPSLAKLS
DEG_APCC_DBOX_1
0.1667
p.P123Q
ACH-000944
Lymphoma
CCLE
PRPSLAKLS
DEG_APCC_DBOX_1
0.1667
p.P123Q
NAMALWA
haematopoietic_and_lymphoid_tissue
COSMIC
PRPSLAKLS
DEG_APCC_DBOX_1
0.1667
p.R100Q
SUP-B15
haematopoietic_and_lymphoid_tissue
COSMIC
PRPSLAKLS
DEG_APCC_DBOX_1
0.0833
Drug responses associated with TDRD9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRPSLAKLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDG6
ATP-dependent RNA helicase TDRD9
DEG_APCC_DBOX_1
109:117
PRPSLAKLS
APC,CDC20,FZR1
0.7231
More...