DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRPVLRSVN
Uniprot ID:
P40337
Source protein:
von Hippel-Lindau disease tumor suppressor
Source gene:
VHL
Class:
DEG_APCC_DBOX_1
Location:
59:67
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9698
ASA_SCORE:
73.5889
COIL:
0.6701
CONS_SCORE:
0.4694
DSS_SCORE:
0.5518
HELIX:
0.0366
FCONS_SCORE:
1.1914
RIG_SCORE:
0.6904
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E52K
TCGA-AZ-6599
COAD
TCGA
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.E52K
DO10606
COAD
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.S65W
TCGA-B0-5077
KIRC
TCGA
PRPVLRSVN
DEG_APCC_DBOX_1
0.6763
p.S65W
DO18412
KIRC
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.6763
p.S65W
ACH-000272
Kidney Cancer
CCLE
PRPVLRSVN
DEG_APCC_DBOX_1
0.6763
p.V74D
TCGA-B0-5097
KIRC
TCGA
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.V74D
TCGA-BP-5175
KIRC
TCGA
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.V74D
DO19370
KIRC
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.V74D
DO16153
KIRC
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.V74D
DO233481
RECA
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.P71R
DO233900
GACA
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.2222
p.V74G
DO17085
KIRC
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.V62M
DO18839
KIRC
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.6097
p.S65L
DO47156
RECA
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.6556
p.S65L
DO233374
RECA
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.6556
p.S65P
DO232116
RECA
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.5641
p.V74A
DO229253
THCA
ICGC
PRPVLRSVN
DEG_APCC_DBOX_1
0.1389
p.E70D
SIDM00153
T-Lymphoblastic Leukemia
GDSC
PRPVLRSVN
DEG_APCC_DBOX_1
0.25
p.E70D
ACH-000964
Leukemia
CCLE
PRPVLRSVN
DEG_APCC_DBOX_1
0.25
Drug responses associated with VHL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRPVLRSVN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40337
von Hippel-Lindau disease tumor suppressor
DEG_APCC_DBOX_1
59:67
PRPVLRSVN
APC,CDC20,FZR1
0.9698
More...