DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRRSLYKLV
Uniprot ID:
Q86UA6
Source protein:
RPA-interacting protein
Source gene:
RPAIN
Class:
DEG_APCC_DBOX_1
Location:
8:16
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.989
ASA_SCORE:
102.4
COIL:
0.6424
CONS_SCORE:
0.6248
DSS_SCORE:
0.3821
HELIX:
0.2916
FCONS_SCORE:
1.0176
RIG_SCORE:
0.7113
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S11F
SIDM00535
Chondrosarcoma
GDSC
PRRSLYKLV
DEG_APCC_DBOX_1
0.7982
p.S11F
ACH-001519
Bone Cancer
CCLE
PRRSLYKLV
DEG_APCC_DBOX_1
0.7982
p.S11F
H-EMC-SS
bone
COSMIC
PRRSLYKLV
DEG_APCC_DBOX_1
0.7982
p.R9P
ACH-001701
Head and Neck Cancer
CCLE
PRRSLYKLV
DEG_APCC_DBOX_1
0.7512
p.R10L
DO228978
LICA
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.7316
p.K14I
SIDM01197
Colorectal Carcinoma
GDSC
PRRSLYKLV
DEG_APCC_DBOX_1
0.642
p.K14I
ACH-000722
Colon/Colorectal Cancer
CCLE
PRRSLYKLV
DEG_APCC_DBOX_1
0.642
p.K14I
SNU-C1
large_intestine
COSMIC
PRRSLYKLV
DEG_APCC_DBOX_1
0.642
p.A2V
TCGA-AA-A01V
COAD
TCGA
PRRSLYKLV
DEG_APCC_DBOX_1
0.6111
p.A2V
DO7822
COAD
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.6111
p.P8S
DO225161
BRCA
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.5641
p.G17V
DO229015
LICA
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.3056
p.W21R
TCGA-CV-7254
HNSC
TCGA
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
p.W21R
DO14168
HNSC
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
p.W21L
TCGA-CV-7254
HNSC
TCGA
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
p.W21L
DO14168
HNSC
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
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Drug responses associated with RPAIN mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PRRSLYKLV
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UA6
RPA-interacting protein
DEG_APCC_DBOX_1
8:16
PRRSLYKLV
APC,CDC20,FZR1
0.989
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