DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRRSLYKLV
Uniprot ID:
Q86UA6
Source protein:
RPA-interacting protein
Source gene:
RPAIN
Class:
DEG_APCC_DBOX_1
Location:
8:16
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.989
ASA_SCORE:
102.4
COIL:
0.6424
CONS_SCORE:
0.6248
DSS_SCORE:
0.3821
HELIX:
0.2916
FCONS_SCORE:
1.0176
RIG_SCORE:
0.7113
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A2V
TCGA-AA-A01V
COAD
TCGA
PRRSLYKLV
DEG_APCC_DBOX_1
0.6111
p.A2V
DO7822
COAD
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.6111
p.W21R
TCGA-CV-7254
HNSC
TCGA
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
p.W21R
DO14168
HNSC
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
p.W21L
TCGA-CV-7254
HNSC
TCGA
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
p.W21L
DO14168
HNSC
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.1944
p.P8S
DO225161
BRCA
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.5641
p.R10L
DO228978
LICA
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.7316
p.G17V
DO229015
LICA
ICGC
PRRSLYKLV
DEG_APCC_DBOX_1
0.3056
p.K14I
SIDM01197
Colorectal Carcinoma
GDSC
PRRSLYKLV
DEG_APCC_DBOX_1
0.642
p.K14I
ACH-000722
Colon/Colorectal Cancer
CCLE
PRRSLYKLV
DEG_APCC_DBOX_1
0.642
p.K14I
SNU-C1
large_intestine
COSMIC
PRRSLYKLV
DEG_APCC_DBOX_1
0.642
p.S11F
SIDM00535
Chondrosarcoma
GDSC
PRRSLYKLV
DEG_APCC_DBOX_1
0.7982
p.S11F
ACH-001519
Bone Cancer
CCLE
PRRSLYKLV
DEG_APCC_DBOX_1
0.7982
p.S11F
H-EMC-SS
bone
COSMIC
PRRSLYKLV
DEG_APCC_DBOX_1
0.7982
p.R9P
ACH-001701
Head and Neck Cancer
CCLE
PRRSLYKLV
DEG_APCC_DBOX_1
0.7512
Drug responses associated with RPAIN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRRSLYKLV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UA6
RPA-interacting protein
DEG_APCC_DBOX_1
8:16
PRRSLYKLV
APC,CDC20,FZR1
0.989
More...