DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRSILTSLL
Uniprot ID:
O15164
Source protein:
Transcription intermediary factor 1-alpha
Source gene:
TRIM24
Class:
DEG_APCC_DBOX_1
Location:
756:764
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9873
ASA_SCORE:
82.9444
COIL:
0.6741
CONS_SCORE:
0.4139
DSS_SCORE:
0.5046
HELIX:
0.2821
FCONS_SCORE:
1.1285
RIG_SCORE:
0.7766
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S748F
TCGA-19-5956
GBM
TCGA
PRSILTSLL
DEG_APCC_DBOX_1
0.5556
p.S771C
TCGA-91-6830
LUAD
TCGA
PRSILTSLL
DEG_APCC_DBOX_1
0.5833
p.S771F
TCGA-EB-A41A
SKCM
TCGA
PRSILTSLL
DEG_APCC_DBOX_1
0.5833
p.S762F
TCGA-EE-A2GC
SKCM
TCGA
PRSILTSLL
DEG_APCC_DBOX_1
0.7982
p.D747N
DO218980
BLCA
ICGC
PRSILTSLL
DEG_APCC_DBOX_1
0.0833
p.S763Y
DO228098
EOPC
ICGC
PRSILTSLL
DEG_APCC_DBOX_1
0.712
p.D772Y
DO229008
LICA
ICGC
PRSILTSLL
DEG_APCC_DBOX_1
0.5556
p.D772Y
DO218944
LUAD
ICGC
PRSILTSLL
DEG_APCC_DBOX_1
0.5556
p.S763F
DO37906
SKCM
ICGC
PRSILTSLL
DEG_APCC_DBOX_1
0.7982
p.S767G
SIDM00136
Colorectal Carcinoma
GDSC
PRSILTSLL
DEG_APCC_DBOX_1
0.25
p.S767G
ACH-000552
Colon/Colorectal Cancer
CCLE
PRSILTSLL
DEG_APCC_DBOX_1
0.25
p.S767G
HT-29
large_intestine
COSMIC
PRSILTSLL
DEG_APCC_DBOX_1
0.25
p.S771P
SIDM00516
Melanoma
GDSC
PRSILTSLL
DEG_APCC_DBOX_1
0.5833
p.S771P
MZ7-mel
skin
COSMIC
PRSILTSLL
DEG_APCC_DBOX_1
0.5833
p.S762Y
SIDM00685
Glioblastoma
GDSC
PRSILTSLL
DEG_APCC_DBOX_1
0.712
p.S762Y
ACH-000819
Brain Cancer
CCLE
PRSILTSLL
DEG_APCC_DBOX_1
0.712
p.S762Y
LN-18
central_nervous_system
COSMIC
PRSILTSLL
DEG_APCC_DBOX_1
0.712
Drug responses associated with TRIM24 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSILTSLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15164
Transcription intermediary factor 1-alpha
DEG_APCC_DBOX_1
756:764
PRSILTSLL
APC,CDC20,FZR1
0.9873
More...