DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRSLLCSIS
Uniprot ID:
Q8NBR9
Source protein:
Uncharacterized protein NDUFV1-DT
Source gene:
NDUFV1-DT
Class:
DEG_APCC_DBOX_1
Location:
43:51
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7515
ASA_SCORE:
46.7333
COIL:
0.4281
CONS_SCORE:
0
DSS_SCORE:
0.3916
HELIX:
0.1387
FCONS_SCORE:
0
RIG_SCORE:
0.6993
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L39M
TCGA-51-4080
LUSC
TCGA
PRSLLCSIS
DEG_APCC_DBOX_1
0.2222
p.L39M
DO26441
LUSC
ICGC
PRSLLCSIS
DEG_APCC_DBOX_1
0.2222
p.L47I
TCGA-AX-A0J0
UCEC
TCGA
PRSLLCSIS
DEG_APCC_DBOX_1
0.7174
p.L47I
DO35589
PBCA
ICGC
PRSLLCSIS
DEG_APCC_DBOX_1
0.7174
p.L47I
DO41133
UCEC
ICGC
PRSLLCSIS
DEG_APCC_DBOX_1
0.7174
p.S45I
TCGA-EE-A2GI
SKCM
TCGA
PRSLLCSIS
DEG_APCC_DBOX_1
0.623
p.S45I
DO37410
SKCM
ICGC
PRSLLCSIS
DEG_APCC_DBOX_1
0.623
p.R35S
TCGA-MV-A51V
BLCA
TCGA
PRSLLCSIS
DEG_APCC_DBOX_1
0.1111
p.R35S
DO474
BLCA
ICGC
PRSLLCSIS
DEG_APCC_DBOX_1
0.1111
p.R33Q
TCGA-W3-AA1Q
SKCM
TCGA
PRSLLCSIS
DEG_APCC_DBOX_1
0.0556
p.R33Q
DO219487
SKCM
ICGC
PRSLLCSIS
DEG_APCC_DBOX_1
0.0556
p.H56Q
DO222404
BTCA
ICGC
PRSLLCSIS
DEG_APCC_DBOX_1
0.1944
p.H56P
ACH-000955
Colon/Colorectal Cancer
CCLE
PRSLLCSIS
DEG_APCC_DBOX_1
0.1944
Drug responses associated with NDUFV1-DT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRSLLCSIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NBR9
Uncharacterized protein NDUFV1-DT
DEG_APCC_DBOX_1
43:51
PRSLLCSIS
APC,CDC20,FZR1
0.7515
More...