DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTLLEALE
Uniprot ID:
Q6P1N0
Source protein:
Coiled-coil and C2 domain-containing protein 1A
Source gene:
CC2D1A
Class:
DEG_APCC_DBOX_1
Location:
345:353
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9968
ASA_SCORE:
81.3444
COIL:
0.3708
CONS_SCORE:
0.4632
DSS_SCORE:
0.6934
HELIX:
0.6288
FCONS_SCORE:
1.369
RIG_SCORE:
0.7491
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P342H
TCGA-06-5856
GBM
TCGA
PRTLLEALE
DEG_APCC_DBOX_1
0.25
p.P342H
DO13456
GBM
ICGC
PRTLLEALE
DEG_APCC_DBOX_1
0.25
p.V361L
TCGA-BH-A0DZ
BRCA
TCGA
PRTLLEALE
DEG_APCC_DBOX_1
0.1111
p.V361L
DO2919
BRCA
ICGC
PRTLLEALE
DEG_APCC_DBOX_1
0.1111
p.V341L
TCGA-CC-A7IH
LIHC
TCGA
PRTLLEALE
DEG_APCC_DBOX_1
0.2222
p.V341L
DO52181
LIHC
ICGC
PRTLLEALE
DEG_APCC_DBOX_1
0.2222
p.R355Q
TCGA-E2-A574
BRCA
TCGA
PRTLLEALE
DEG_APCC_DBOX_1
0.2778
p.R355Q
DO49022
BRCA
ICGC
PRTLLEALE
DEG_APCC_DBOX_1
0.2778
p.L349M
SIDM00145
T-Lymphoblastic Leukemia
GDSC
PRTLLEALE
DEG_APCC_DBOX_1
0.711
p.L349M
ACH-001127
Leukemia
CCLE
PRTLLEALE
DEG_APCC_DBOX_1
0.711
p.L349M
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PRTLLEALE
DEG_APCC_DBOX_1
0.711
Drug responses associated with CC2D1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTLLEALE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P1N0
Coiled-coil and C2 domain-containing protein 1A
DEG_APCC_DBOX_1
345:353
PRTLLEALE
APC,CDC20,FZR1
0.9968
More...