DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTLLKNIL
Uniprot ID:
Q96BT3
Source protein:
Centromere protein T
Source gene:
CENPT
Class:
DEG_APCC_DBOX_1
Location:
86:94
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7035
ASA_SCORE:
77.1
COIL:
0.4091
CONS_SCORE:
0.6702
DSS_SCORE:
0.4296
HELIX:
0.5352
FCONS_SCORE:
1.4093
RIG_SCORE:
0.8168
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L103M
TCGA-D3-A3CE
SKCM
TCGA
PRTLLKNIL
DEG_APCC_DBOX_1
0.0833
p.L103M
DO37405
SKCM
ICGC
PRTLLKNIL
DEG_APCC_DBOX_1
0.0833
p.A97S
TCGA-EE-A20F
SKCM
TCGA
PRTLLKNIL
DEG_APCC_DBOX_1
0.25
p.A97S
DO37961
SKCM
ICGC
PRTLLKNIL
DEG_APCC_DBOX_1
0.25
p.N92S
TCGA-EE-A2MS
SKCM
TCGA
PRTLLKNIL
DEG_APCC_DBOX_1
0.5958
p.N92S
DO37567
SKCM
ICGC
PRTLLKNIL
DEG_APCC_DBOX_1
0.5958
p.G79V
SIDM00789
Colorectal Carcinoma
GDSC
PRTLLKNIL
DEG_APCC_DBOX_1
0.1389
p.G79V
ACH-000997
Colon/Colorectal Cancer
CCLE
PRTLLKNIL
DEG_APCC_DBOX_1
0.1389
p.G79V
HCT-15
large_intestine
COSMIC
PRTLLKNIL
DEG_APCC_DBOX_1
0.1389
p.H80R
SIDM00918
Ovarian Carcinoma
GDSC
PRTLLKNIL
DEG_APCC_DBOX_1
0.1667
p.H80R
ACH-000103
Ovarian Cancer
CCLE
PRTLLKNIL
DEG_APCC_DBOX_1
0.1667
p.H80R
Caov-4
ovary
COSMIC
PRTLLKNIL
DEG_APCC_DBOX_1
0.1667
Drug responses associated with CENPT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTLLKNIL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96BT3
Centromere protein T
DEG_APCC_DBOX_1
86:94
PRTLLKNIL
APC,CDC20,FZR1
0.7035
More...