DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTLLRRVL
Uniprot ID:
Q96BT3
Source protein:
Centromere protein T
Source gene:
CENPT
Class:
DEG_APCC_DBOX_1
Location:
12:20
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9912
ASA_SCORE:
69.7333
COIL:
0.2591
CONS_SCORE:
0.5666
DSS_SCORE:
0.69
HELIX:
0.7107
FCONS_SCORE:
1.2235
RIG_SCORE:
0.7357
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R13S
DO229035
LICA
ICGC
PRTLLRRVL
DEG_APCC_DBOX_1
0.7427
p.P25Q
DO229037
LICA
ICGC
PRTLLRRVL
DEG_APCC_DBOX_1
0.1944
p.R13H
DO23102
LINC
ICGC
PRTLLRRVL
DEG_APCC_DBOX_1
0.8244
p.T14M
DO46691
PACA
ICGC
PRTLLRRVL
DEG_APCC_DBOX_1
0.6312
p.A23T
SIDM00845
Burkitt's Lymphoma
GDSC
PRTLLRRVL
DEG_APCC_DBOX_1
0.25
p.A23T
SIDM00254
Neuroblastoma
GDSC
PRTLLRRVL
DEG_APCC_DBOX_1
0.25
p.D3G
ACH-000990
Endometrial/Uterine Cancer
CCLE
PRTLLRRVL
DEG_APCC_DBOX_1
0.0833
Drug responses associated with CENPT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTLLRRVL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96BT3
Centromere protein T
DEG_APCC_DBOX_1
12:20
PRTLLRRVL
APC,CDC20,FZR1
0.9912
More...