DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTPNRS
Uniprot ID:
Q9Y6G9
Source protein:
Cytoplasmic dynein 1 light intermediate chain 1
Source gene:
DYNC1LI1
Class:
DEG_SCF_FBW7_1
Location:
406:412
E3 ligase:
FBXW7
DEGRON score:
0.9877
ASA_SCORE:
103.1571
COIL:
0.9261
CONS_SCORE:
0.2788
DSS_SCORE:
0.6889
HELIX:
0.0359
FCONS_SCORE:
0.999
RIG_SCORE:
0.5645
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S419N
TCGA-AP-A1DK
UCEC
TCGA
PRTPNRS
DEG_SCF_FBW7_1
0.5833
p.P422H
TCGA-DA-A1I5
SKCM
TCGA
PRTPNRS
DEG_SCF_FBW7_1
0.0556
p.T399A
DO44055
BLCA
ICGC
PRTPNRS
DEG_SCF_FBW7_1
0.1389
p.T399A
HTC-C3
thyroid
COSMIC
PRTPNRS
DEG_SCF_FBW7_1
0.1389
p.E403K
DO52207
LIHC
ICGC
PRTPNRS
DEG_SCF_FBW7_1
0.25
p.S407F
DO220887
MELA
ICGC
PRTPNRS
DEG_SCF_FBW7_1
0.7982
p.P401S
DO222415
MELA
ICGC
PRTPNRS
DEG_SCF_FBW7_1
0.1944
p.R400K
SIDM01577
Plasma Cell Myeloma
GDSC
PRTPNRS
DEG_SCF_FBW7_1
0.1667
p.R400K
ACH-000889
Myeloma
CCLE
PRTPNRS
DEG_SCF_FBW7_1
0.1667
p.P406Q
ACH-000020
Leukemia
CCLE
PRTPNRS
DEG_SCF_FBW7_1
0.7035
p.T402M
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
PRTPNRS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with DYNC1LI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTPNRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y6G9
Cytoplasmic dynein 1 light intermediate chain 1
DEG_SCF_FBW7_1
406:412
PRTPNRS
FBXW7
0.9877
More...