DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTPPIT
Uniprot ID:
Q5T200
Source protein:
Zinc finger CCCH domain-containing protein 13
Source gene:
ZC3H13
Class:
DEG_SCF_FBW7_1
Location:
1031:1037
E3 ligase:
FBXW7
DEGRON score:
0.998
ASA_SCORE:
108.9
COIL:
0.9601
CONS_SCORE:
0.5618
DSS_SCORE:
0.7007
HELIX:
0.021
FCONS_SCORE:
1.5137
RIG_SCORE:
0.6117
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1035S
TCGA-24-1564
OV
TCGA
PRTPPIT
DEG_SCF_FBW7_1
0.5641
p.P1035S
DO28022
OV
ICGC
PRTPPIT
DEG_SCF_FBW7_1
0.5641
p.P1035H
TCGA-DJ-A2QB
THCA
TCGA
PRTPPIT
DEG_SCF_FBW7_1
0.6583
p.P1035H
DO39421
THCA
ICGC
PRTPPIT
DEG_SCF_FBW7_1
0.6583
p.E1040D
DO231183
LUSC
ICGC
PRTPPIT
DEG_SCF_FBW7_1
0.25
p.A1022V
SIDM00789
Colorectal Carcinoma
GDSC
PRTPPIT
DEG_SCF_FBW7_1
0.0833
p.A1022V
ACH-000997
Colon/Colorectal Cancer
CCLE
PRTPPIT
DEG_SCF_FBW7_1
0.0833
p.A1022V
HCT-15
large_intestine
COSMIC
PRTPPIT
DEG_SCF_FBW7_1
0.0833
Drug responses associated with ZC3H13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTPPIT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T200
Zinc finger CCCH domain-containing protein 13
DEG_SCF_FBW7_1
1031:1037
PRTPPIT
FBXW7
0.998
More...