DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSGTPDHS
Uniprot ID:
Q9NPC8
Source protein:
Homeobox protein SIX2
Source gene:
SIX2
Class:
DEG_SCF_FBW7_1
Location:
218:225
E3 ligase:
FBXW7
DEGRON score:
0.9891
ASA_SCORE:
85.9
COIL:
0.9583
CONS_SCORE:
0.2818
DSS_SCORE:
0.7895
HELIX:
0.0283
FCONS_SCORE:
0.9819
RIG_SCORE:
0.4974
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P229A
TCGA-62-8399
LUAD
TCGA
PSGTPDHS
DEG_SCF_FBW7_1
0.2222
p.P229A
DO24606
LUAD
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.2222
p.T217I
TCGA-AA-A010
COAD
TCGA
PSGTPDHS
DEG_SCF_FBW7_1
0.3056
p.S219L
TCGA-AX-A06F
UCEC
TCGA
PSGTPDHS
DEG_SCF_FBW7_1
0.6556
p.S219L
DO41752
UCEC
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.6556
p.E213D
TCGA-B5-A3FC
UCEC
TCGA
PSGTPDHS
DEG_SCF_FBW7_1
0.1944
p.E213D
DO41871
UCEC
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.1944
p.G220W
TCGA-BF-A1PU
SKCM
TCGA
PSGTPDHS
DEG_SCF_FBW7_1
0.6714
p.G220W
DO50278
SKCM
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.6714
p.S226T
TCGA-DD-A1EJ
LIHC
TCGA
PSGTPDHS
DEG_SCF_FBW7_1
0.3056
p.S226T
DO22994
LIHC
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.3056
p.S225L
TCGA-EE-A2MR
SKCM
TCGA
PSGTPDHS
DEG_SCF_FBW7_1
0.7667
p.S225L
DO37819
SKCM
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.7667
p.E213K
DO227947
BRCA
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.1944
p.A230T
DO222755
COCA
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.1944
p.A230T
SIDM01090
Colorectal Carcinoma
GDSC
PSGTPDHS
DEG_SCF_FBW7_1
0.1944
p.A230T
ACH-000943
Colon/Colorectal Cancer
CCLE
PSGTPDHS
DEG_SCF_FBW7_1
0.1944
p.A230T
RKO
large_intestine
COSMIC
PSGTPDHS
DEG_SCF_FBW7_1
0.1944
p.P235S
DO46368
OV
ICGC
PSGTPDHS
DEG_SCF_FBW7_1
0.0556
p.G220V
SIDM00258
Neuroblastoma
GDSC
PSGTPDHS
DEG_SCF_FBW7_1
0.6421
p.G220V
ACH-002279
Neuroblastoma
CCLE
PSGTPDHS
DEG_SCF_FBW7_1
0.6421
p.G220V
NB12
autonomic_ganglia
COSMIC
PSGTPDHS
DEG_SCF_FBW7_1
0.6421
p.S211G
ACH-001802
Liposarcoma
CCLE
PSGTPDHS
DEG_SCF_FBW7_1
0.5833
Drug responses associated with SIX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSGTPDHS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NPC8
Homeobox protein SIX2
DEG_SCF_FBW7_1
218:225
PSGTPDHS
FBXW7
0.9891
More...