DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSGTPPGT
Uniprot ID:
Q6UXF1
Source protein:
Transmembrane protein 108
Source gene:
TMEM108
Class:
DEG_SCF_FBW7_1
Location:
42:49
E3 ligase:
FBXW7
DEGRON score:
0.9899
ASA_SCORE:
80.65
COIL:
0.9631
CONS_SCORE:
0.4074
DSS_SCORE:
0.5996
HELIX:
0.013
FCONS_SCORE:
0.9803
RIG_SCORE:
0.5661
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G44C
TCGA-2Y-A9H9
LIHC
TCGA
PSGTPPGT
DEG_SCF_FBW7_1
0.6489
p.G44C
DO219537
LIHC
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.6489
p.P46S
TCGA-90-A4ED
LUSC
TCGA
PSGTPPGT
DEG_SCF_FBW7_1
0.6752
p.P46S
TCGA-D3-A3MU
SKCM
TCGA
PSGTPPGT
DEG_SCF_FBW7_1
0.6752
p.P46S
DO45482
LUSC
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.6752
p.P46S
DO220884
MELA
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.6752
p.P46S
DO47337
SKCM
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.6752
p.G48E
TCGA-A2-A0EO
BRCA
TCGA
PSGTPPGT
DEG_SCF_FBW7_1
0.6087
p.G48E
DO3816
BRCA
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.6087
p.A53T
TCGA-AJ-A3EK
UCEC
TCGA
PSGTPPGT
DEG_SCF_FBW7_1
0.2222
p.A53T
DO41584
UCEC
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.2222
p.S43L
TCGA-EO-A22U
UCEC
TCGA
PSGTPPGT
DEG_SCF_FBW7_1
0.6556
p.S43L
DO43755
UCEC
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.6556
p.P34S
TCGA-ER-A1A1
SKCM
TCGA
PSGTPPGT
DEG_SCF_FBW7_1
0.1111
p.P34S
DO37413
SKCM
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.1111
p.R35G
DO234459
ESAD
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.1389
p.R49S
DO229027
LICA
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.7427
p.P46F
DO220884
MELA
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.7897
p.P46L
DO220884
MELA
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.7582
p.P46L
DO222908
MELA
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.7582
p.P46L
HCC-56
large_intestine
COSMIC
PSGTPPGT
DEG_SCF_FBW7_1
0.7582
p.S36N
DO220047
SARC
ICGC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM01005
Acute Myeloid Leukemia
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM00486
Squamous Cell Lung Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM00278
Esophageal Squamous Cell Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM00360
Other Solid Cancers
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM00271
Gastric Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM01449
Pancreatic Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM01335
Kidney Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM00008
Ovarian Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM01435
Hepatocellular Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM01442
Glioma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM01343
Gastric Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.E36Q
SIDM00159
Biliary Tract Carcinoma
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.1667
p.P47R
SIDM01263
T-Lymphoblastic Leukemia
GDSC
PSGTPPGT
DEG_SCF_FBW7_1
0.6401
p.E32D
SNU-81
large_intestine
COSMIC
PSGTPPGT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with TMEM108 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSGTPPGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UXF1
Transmembrane protein 108
DEG_SCF_FBW7_1
42:49
PSGTPPGT
FBXW7
0.9899
More...