DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSKTPINE
Uniprot ID:
Q6NXP0
Source protein:
EF-hand calcium-binding domain-containing protein 12
Source gene:
EFCAB12
Class:
DEG_SCF_FBW7_2
Location:
20:27
E3 ligase:
FBXW7
DEGRON score:
0.5386
ASA_SCORE:
81.8875
COIL:
0.7094
CONS_SCORE:
0.3182
DSS_SCORE:
0.2166
HELIX:
0.271
FCONS_SCORE:
0.7008
RIG_SCORE:
0.7169
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G17V
TCGA-55-7724
LUAD
TCGA
PSKTPINE
DEG_SCF_FBW7_2
0.25
p.G17V
DO45373
LUAD
ICGC
PSKTPINE
DEG_SCF_FBW7_2
0.25
p.G17E
TCGA-CV-7254
HNSC
TCGA
PSKTPINE
DEG_SCF_FBW7_2
0.25
p.G17E
DO14168
HNSC
ICGC
PSKTPINE
DEG_SCF_FBW7_2
0.25
p.K22E
DO8264
COAD
ICGC
PSKTPINE
DEG_SCF_FBW7_2
0.591
p.D33V
DO23521
LIRI
ICGC
PSKTPINE
DEG_SCF_FBW7_2
0.1667
p.K22T
SIDM00107
Melanoma
GDSC
PSKTPINE
DEG_SCF_FBW7_2
0.6195
p.K22T
ACH-000425
Skin Cancer
CCLE
PSKTPINE
DEG_SCF_FBW7_2
0.6195
p.K22T
ACH-002004
Skin Cancer
CCLE
PSKTPINE
DEG_SCF_FBW7_2
0.6195
p.K22T
UACC-62
skin
COSMIC
PSKTPINE
DEG_SCF_FBW7_2
0.6195
p.S21C
SIDM00210
Ovarian Carcinoma
GDSC
PSKTPINE
DEG_SCF_FBW7_2
0.643
p.S21C
SIDM00878
Breast Carcinoma
GDSC
PSKTPINE
DEG_SCF_FBW7_2
0.643
p.P20L
SIDM00971
Breast Carcinoma
GDSC
PSKTPINE
DEG_SCF_FBW7_2
0.6471
p.P20L
ZR-75-30
breast
COSMIC
PSKTPINE
DEG_SCF_FBW7_2
0.6471
p.V37I
SIDM00214
Colorectal Carcinoma
GDSC
PSKTPINE
DEG_SCF_FBW7_2
0.0556
p.V37I
ACH-000955
Colon/Colorectal Cancer
CCLE
PSKTPINE
DEG_SCF_FBW7_2
0.0556
p.V37I
SNU-407
large_intestine
COSMIC
PSKTPINE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with EFCAB12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSKTPINE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6NXP0
EF-hand calcium-binding domain-containing protein 12
DEG_SCF_FBW7_2
20:27
PSKTPINE
FBXW7
0.5386
More...