DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSPTPQSS
Uniprot ID:
O95503
Source protein:
Chromobox protein homolog 6
Source gene:
CBX6
Class:
DEG_SCF_FBW7_1
Location:
279:286
E3 ligase:
FBXW7
DEGRON score:
0.9973
ASA_SCORE:
94.7125
COIL:
0.9658
CONS_SCORE:
0.5243
DSS_SCORE:
0.8336
HELIX:
0.017
FCONS_SCORE:
1.2451
RIG_SCORE:
0.4746
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A270S
TCGA-85-8584
LUSC
TCGA
PSPTPQSS
DEG_SCF_FBW7_1
0.0833
p.P281L
TCGA-EL-A3N2
THCA
TCGA
PSPTPQSS
DEG_SCF_FBW7_1
0.6471
p.P281L
DO39155
THCA
ICGC
PSPTPQSS
DEG_SCF_FBW7_1
0.6471
p.E280K
DO233259
GACA
ICGC
PSPTPQSS
DEG_SCF_FBW7_1
0.7022
p.P284T
DO42472
UCEC
ICGC
PSPTPQSS
DEG_SCF_FBW7_1
0.7031
p.A270T
SIDM02059
Colorectal Carcinoma
GDSC
PSPTPQSS
DEG_SCF_FBW7_1
0.0833
p.S276F
SIDM00403
T-Lymphoblastic Leukemia
GDSC
PSPTPQSS
DEG_SCF_FBW7_1
0.25
p.S276F
ACH-000636
Leukemia
CCLE
PSPTPQSS
DEG_SCF_FBW7_1
0.25
p.S275F
ACH-000968
Skin Cancer
CCLE
PSPTPQSS
DEG_SCF_FBW7_1
0.2222
p.S275F
ACH-000987
Skin Cancer
CCLE
PSPTPQSS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with CBX6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSPTPQSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95503
Chromobox protein homolog 6
DEG_SCF_FBW7_1
279:286
PSPTPQSS
FBXW7
0.9973
More...