DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSPTPSSS
Uniprot ID:
Q17RY0
Source protein:
Cytoplasmic polyadenylation element-binding protein 4
Source gene:
CPEB4
Class:
DEG_SCF_FBW7_1
Location:
291:298
E3 ligase:
FBXW7
DEGRON score:
0.9983
ASA_SCORE:
75.5625
COIL:
0.9543
CONS_SCORE:
0.3829
DSS_SCORE:
0.6151
HELIX:
0.0268
FCONS_SCORE:
1.0911
RIG_SCORE:
0.5232
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y288C
TCGA-22-4599
LUSC
TCGA
PSPTPSSS
DEG_SCF_FBW7_1
0.25
p.Y288C
DO26945
LUSC
ICGC
PSPTPSSS
DEG_SCF_FBW7_1
0.25
p.G303C
TCGA-FS-A1YW
SKCM
TCGA
PSPTPSSS
DEG_SCF_FBW7_1
0.1944
p.G303C
DO37734
SKCM
ICGC
PSPTPSSS
DEG_SCF_FBW7_1
0.1944
p.G304V
DO229027
LICA
ICGC
PSPTPSSS
DEG_SCF_FBW7_1
0.1667
p.G303V
SIDM00168
Head and Neck Carcinoma
GDSC
PSPTPSSS
DEG_SCF_FBW7_1
0.1944
p.G303V
ACH-000549
Head and Neck Cancer
CCLE
PSPTPSSS
DEG_SCF_FBW7_1
0.1944
p.C299G
COLO-684
endometrium
COSMIC
PSPTPSSS
DEG_SCF_FBW7_1
0.3056
p.V297L
SW156
kidney
COSMIC
PSPTPSSS
DEG_SCF_FBW7_1
0.6765
p.C282G
COLO-684
endometrium
COSMIC
PSPTPSSS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with CPEB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSPTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q17RY0
Cytoplasmic polyadenylation element-binding protein 4
DEG_SCF_FBW7_1
291:298
PSPTPSSS
FBXW7
0.9983
More...