DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSSTPQST
Uniprot ID:
Q7Z5J4
Source protein:
Retinoic acid-induced protein 1
Source gene:
RAI1
Class:
DEG_SCF_FBW7_1
Location:
501:508
E3 ligase:
FBXW7
DEGRON score:
0.8836
ASA_SCORE:
94.4125
COIL:
0.9539
CONS_SCORE:
0.6239
DSS_SCORE:
0.8557
HELIX:
0.0209
FCONS_SCORE:
1.0067
RIG_SCORE:
0.505
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E491V
TCGA-12-0818
GBM
TCGA
PSSTPQST
DEG_SCF_FBW7_1
0.0556
p.E491V
DO12892
GBM
ICGC
PSSTPQST
DEG_SCF_FBW7_1
0.0556
p.S503I
DO228948
LICA
ICGC
PSSTPQST
DEG_SCF_FBW7_1
0.623
p.S507C
DO229141
LMS
ICGC
PSSTPQST
DEG_SCF_FBW7_1
0.643
p.E491K
DO51501
PACA
ICGC
PSSTPQST
DEG_SCF_FBW7_1
0.0556
p.E511K
SIDM00399
Head and Neck Carcinoma
GDSC
PSSTPQST
DEG_SCF_FBW7_1
0.25
p.E511K
SCC90
upper_aerodigestive_tract
COSMIC
PSSTPQST
DEG_SCF_FBW7_1
0.25
p.S502R
SIDM01233
Colorectal Carcinoma
GDSC
PSSTPQST
DEG_SCF_FBW7_1
0.6316
p.S502R
ACH-000003
CCLE
PSSTPQST
DEG_SCF_FBW7_1
0.6316
p.S502R
ACH-000009
Colon/Colorectal Cancer
CCLE
PSSTPQST
DEG_SCF_FBW7_1
0.6316
p.S502R
C2BBe1
large_intestine
COSMIC
PSSTPQST
DEG_SCF_FBW7_1
0.6316
p.Q513R
SIDM00277
Acute Myeloid Leukemia
GDSC
PSSTPQST
DEG_SCF_FBW7_1
0.1944
p.Y517C
SIDM00498
Colorectal Carcinoma
GDSC
PSSTPQST
DEG_SCF_FBW7_1
0.5278
p.Y517C
ACH-000970
Colon/Colorectal Cancer
CCLE
PSSTPQST
DEG_SCF_FBW7_1
0.5278
p.Y517C
SNU-C5
large_intestine
COSMIC
PSSTPQST
DEG_SCF_FBW7_1
0.5278
p.T504M
SIDM01051
Ovarian Carcinoma
GDSC
PSSTPQST
DEG_SCF_FBW7_1
0.7423
p.T504M
ACH-000936
Ovarian Cancer
CCLE
PSSTPQST
DEG_SCF_FBW7_1
0.7423
p.T504M
EFO-27
ovary
COSMIC
PSSTPQST
DEG_SCF_FBW7_1
0.7423
Drug responses associated with RAI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSSTPQST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z5J4
Retinoic acid-induced protein 1
DEG_SCF_FBW7_1
501:508
PSSTPQST
FBXW7
0.8836
More...