DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSSTPSST
Uniprot ID:
Q6B0I6
Source protein:
Lysine-specific demethylase 4D
Source gene:
KDM4D
Class:
DEG_SCF_FBW7_1
Location:
429:436
E3 ligase:
FBXW7
DEGRON score:
0.9686
ASA_SCORE:
91.725
COIL:
0.9624
CONS_SCORE:
0.4027
DSS_SCORE:
0.791
HELIX:
0.0146
FCONS_SCORE:
1.0699
RIG_SCORE:
0.4689
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S430T
TCGA-23-1029
OV
TCGA
PSSTPSST
DEG_SCF_FBW7_1
0.6005
p.S430T
DO28571
OV
ICGC
PSSTPSST
DEG_SCF_FBW7_1
0.6005
p.T432S
TCGA-A1-A0SO
BRCA
TCGA
PSSTPSST
DEG_SCF_FBW7_1
0.7116
p.T432S
DO2020
BRCA
ICGC
PSSTPSST
DEG_SCF_FBW7_1
0.7116
p.G438C
TCGA-D3-A2JP
SKCM
TCGA
PSSTPSST
DEG_SCF_FBW7_1
0.2778
p.G438C
DO47407
SKCM
ICGC
PSSTPSST
DEG_SCF_FBW7_1
0.2778
p.S435F
TCGA-JW-A5VL
CESC
TCGA
PSSTPSST
DEG_SCF_FBW7_1
0.6871
p.S435F
DO49976
CESC
ICGC
PSSTPSST
DEG_SCF_FBW7_1
0.6871
p.I444S
TCGA-VQ-A8P5
STAD
TCGA
PSSTPSST
DEG_SCF_FBW7_1
0.1111
p.I444S
DO51763
STAD
ICGC
PSSTPSST
DEG_SCF_FBW7_1
0.1111
p.V423A
DO8858
COAD
ICGC
PSSTPSST
DEG_SCF_FBW7_1
0.1667
p.R419L
SIDM00521
Small Cell Lung Carcinoma
GDSC
PSSTPSST
DEG_SCF_FBW7_1
0.0556
p.R419L
ACH-000743
Lung Cancer
CCLE
PSSTPSST
DEG_SCF_FBW7_1
0.0556
p.R419L
COR-L95
lung
COSMIC
PSSTPSST
DEG_SCF_FBW7_1
0.0556
Drug responses associated with KDM4D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSSTPSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6B0I6
Lysine-specific demethylase 4D
DEG_SCF_FBW7_1
429:436
PSSTPSST
FBXW7
0.9686
More...