DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSSTPVPT
Uniprot ID:
Q8NEY1
Source protein:
Neuron navigator 1
Source gene:
NAV1
Class:
DEG_SCF_FBW7_1
Location:
899:906
E3 ligase:
FBXW7
DEGRON score:
0.969
ASA_SCORE:
88.7375
COIL:
0.9711
CONS_SCORE:
0.3525
DSS_SCORE:
0.6865
HELIX:
0.0139
FCONS_SCORE:
0.9155
RIG_SCORE:
0.5309
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M892I
TCGA-AA-A010
COAD
TCGA
PSSTPVPT
DEG_SCF_FBW7_1
0.1389
p.L894I
TCGA-AX-A1CE
UCEC
TCGA
PSSTPVPT
DEG_SCF_FBW7_1
0.1944
p.L894I
DO42280
UCEC
ICGC
PSSTPVPT
DEG_SCF_FBW7_1
0.1944
p.S900N
TCGA-CC-A7IL
LIHC
TCGA
PSSTPVPT
DEG_SCF_FBW7_1
0.5958
p.S900N
DO52185
LIHC
ICGC
PSSTPVPT
DEG_SCF_FBW7_1
0.5958
p.T915I
TCGA-D1-A15X
UCEC
TCGA
PSSTPVPT
DEG_SCF_FBW7_1
0.0833
p.T915I
DO43274
UCEC
ICGC
PSSTPVPT
DEG_SCF_FBW7_1
0.0833
p.M892V
DO234316
ESAD
ICGC
PSSTPVPT
DEG_SCF_FBW7_1
0.1389
p.T902A
DO228359
LICA
ICGC
PSSTPVPT
DEG_SCF_FBW7_1
0.7139
p.S896I
DO229027
LICA
ICGC
PSSTPVPT
DEG_SCF_FBW7_1
0.25
p.H892Y
DO219131
LUSC
ICGC
PSSTPVPT
DEG_SCF_FBW7_1
0.1389
p.V904I
SIDM00510
Small Cell Lung Carcinoma
GDSC
PSSTPVPT
DEG_SCF_FBW7_1
0.5965
p.V904I
COR-L303
lung
COSMIC
PSSTPVPT
DEG_SCF_FBW7_1
0.5965
p.S896T
SIDM01433
Kidney Carcinoma
GDSC
PSSTPVPT
DEG_SCF_FBW7_1
0.25
Drug responses associated with NAV1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSSTPVPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEY1
Neuron navigator 1
DEG_SCF_FBW7_1
899:906
PSSTPVPT
FBXW7
0.969
More...