DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSTPLSE
Uniprot ID:
Q92547
Source protein:
DNA topoisomerase 2-binding protein 1
Source gene:
TOPBP1
Class:
DEG_SCF_FBW7_2
Location:
859:865
E3 ligase:
FBXW7
DEGRON score:
0.9993
ASA_SCORE:
77.2
COIL:
0.7367
CONS_SCORE:
0.3441
DSS_SCORE:
0.5357
HELIX:
0.2164
FCONS_SCORE:
1.1014
RIG_SCORE:
0.7033
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P859L
TCGA-A5-A1OF
UCEC
TCGA
PSTPLSE
DEG_SCF_FBW7_2
0.6471
p.P859L
DO42568
UCEC
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.6471
p.N870T
TCGA-A5-A2K5
UCEC
TCGA
PSTPLSE
DEG_SCF_FBW7_2
0.1944
p.N870T
DO41379
UCEC
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.1944
p.T861M
TCGA-BR-4184
STAD
TCGA
PSTPLSE
DEG_SCF_FBW7_2
0.8534
p.T861M
TCGA-F4-6856
COAD
TCGA
PSTPLSE
DEG_SCF_FBW7_2
0.8534
p.T861M
DO9114
COAD
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.8534
p.T861M
DO38328
STAD
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.8534
p.A874V
TCGA-EI-6917
READ
TCGA
PSTPLSE
DEG_SCF_FBW7_2
0.0833
p.A874V
DO36881
READ
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.0833
p.V866F
TCGA-VS-A950
CESC
TCGA
PSTPLSE
DEG_SCF_FBW7_2
0.3056
p.V866F
DO51635
CESC
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.3056
p.V868I
DO50346
ESAD
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.25
p.P849S
DO11854
GBM
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.0556
p.S860N
DO50970
LICA
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.7069
p.I867M
DO23532
LIRI
ICGC
PSTPLSE
DEG_SCF_FBW7_2
0.2778
p.N872S
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
PSTPLSE
DEG_SCF_FBW7_2
0.1389
p.A871V
CW-2
large_intestine
COSMIC
PSTPLSE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with TOPBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSTPLSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92547
DNA topoisomerase 2-binding protein 1
DEG_SCF_FBW7_2
859:865
PSTPLSE
FBXW7
0.9993
More...