DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSTPPPT
Uniprot ID:
Q86YV9
Source protein:
Hermansky-Pudlak syndrome 6 protein
Source gene:
HPS6
Class:
DEG_SCF_FBW7_1
Location:
764:770
E3 ligase:
FBXW7
DEGRON score:
0.8897
ASA_SCORE:
71.2857
COIL:
0.9703
CONS_SCORE:
0.7416
DSS_SCORE:
0.7227
HELIX:
0.014
FCONS_SCORE:
1.351
RIG_SCORE:
0.6127
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P768L
TCGA-06-0124
GBM
TCGA
PSTPPPT
DEG_SCF_FBW7_1
0.6471
p.P768L
DO12214
GBM
ICGC
PSTPPPT
DEG_SCF_FBW7_1
0.6471
p.L754I
TCGA-AG-A002
READ
TCGA
PSTPPPT
DEG_SCF_FBW7_1
0.0556
p.D763Y
TCGA-BP-5168
KIRC
TCGA
PSTPPPT
DEG_SCF_FBW7_1
0.3056
p.D763Y
DO18671
KIRC
ICGC
PSTPPPT
DEG_SCF_FBW7_1
0.3056
p.P769S
TCGA-EE-A2GR
SKCM
TCGA
PSTPPPT
DEG_SCF_FBW7_1
0.5641
p.P769S
DO37996
SKCM
ICGC
PSTPPPT
DEG_SCF_FBW7_1
0.5641
p.P764S
TCGA-EO-A22X
UCEC
TCGA
PSTPPPT
DEG_SCF_FBW7_1
0.6752
p.P764S
DO43907
UCEC
ICGC
PSTPPPT
DEG_SCF_FBW7_1
0.6752
p.D763N
SIDM01016
T-Lymphoblastic Leukemia
GDSC
PSTPPPT
DEG_SCF_FBW7_1
0.3056
p.D763N
ACH-000995
Leukemia
CCLE
PSTPPPT
DEG_SCF_FBW7_1
0.3056
p.D763N
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PSTPPPT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with HPS6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSTPPPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YV9
Hermansky-Pudlak syndrome 6 protein
DEG_SCF_FBW7_1
764:770
PSTPPPT
FBXW7
0.8897
More...