DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTDTPLKE
Uniprot ID:
O60271
Source protein:
C-Jun-amino-terminal kinase-interacting protein 4
Source gene:
SPAG9
Class:
DEG_SCF_FBW7_2
Location:
289:296
E3 ligase:
FBXW7
DEGRON score:
0.9888
ASA_SCORE:
93.1875
COIL:
0.8431
CONS_SCORE:
0.2949
DSS_SCORE:
0.5885
HELIX:
0.1261
FCONS_SCORE:
1.1129
RIG_SCORE:
0.7364
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P289L
TCGA-D6-6516
HNSC
TCGA
PTDTPLKE
DEG_SCF_FBW7_2
0.6471
p.K295N
TCGA-EO-A3B0
UCEC
TCGA
PTDTPLKE
DEG_SCF_FBW7_2
0.5806
p.K281N
DO222769
COCA
ICGC
PTDTPLKE
DEG_SCF_FBW7_2
0.1111
p.K281N
DO219773
UCEC
ICGC
PTDTPLKE
DEG_SCF_FBW7_2
0.1111
p.Q306K
DO228948
LICA
ICGC
PTDTPLKE
DEG_SCF_FBW7_2
0.0556
p.A293E
DO229019
LICA
ICGC
PTDTPLKE
DEG_SCF_FBW7_2
0.7701
p.S283L
SIDM00097
Breast Carcinoma
GDSC
PTDTPLKE
DEG_SCF_FBW7_2
0.6111
p.S283L
SIDM01775
B-Cell Non-Hodgkin's Lymphoma
GDSC
PTDTPLKE
DEG_SCF_FBW7_2
0.6111
p.E298K
ACH-000783
Breast Cancer
CCLE
PTDTPLKE
DEG_SCF_FBW7_2
0.2778
p.E298K
CAMA-1
breast
COSMIC
PTDTPLKE
DEG_SCF_FBW7_2
0.2778
p.A293S
ACH-002143
Skin Cancer
CCLE
PTDTPLKE
DEG_SCF_FBW7_2
0.7588
p.A293S
IST-MEL1
skin
COSMIC
PTDTPLKE
DEG_SCF_FBW7_2
0.7588
Drug responses associated with SPAG9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTDTPLKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60271
C-Jun-amino-terminal kinase-interacting protein 4
DEG_SCF_FBW7_2
289:296
PTDTPLKE
FBXW7
0.9888
More...