DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTKTPEPE
Uniprot ID:
Q96NT0
Source protein:
Coiled-coil domain-containing protein 115
Source gene:
CCDC115
Class:
DEG_SCF_FBW7_2
Location:
107:114
E3 ligase:
FBXW7
DEGRON score:
0.6666
ASA_SCORE:
110.1875
COIL:
0.9474
CONS_SCORE:
0.3783
DSS_SCORE:
0.801
HELIX:
0.0334
FCONS_SCORE:
0.6649
RIG_SCORE:
0.5724
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K105N
TCGA-17-Z014
LUAD
TCGA
PTKTPEPE
DEG_SCF_FBW7_2
0.2778
p.K105N
TCGA-63-6202
LUSC
TCGA
PTKTPEPE
DEG_SCF_FBW7_2
0.2778
p.R103M
TCGA-21-1081
LUSC
TCGA
PTKTPEPE
DEG_SCF_FBW7_2
0.2222
p.R97S
TCGA-MN-A4N4
LUAD
TCGA
PTKTPEPE
DEG_SCF_FBW7_2
0.0556
p.K104Q
DO231114
LUSC
ICGC
PTKTPEPE
DEG_SCF_FBW7_2
0.25
p.R98M
DO26930
LUSC
ICGC
PTKTPEPE
DEG_SCF_FBW7_2
0.0833
p.K100N
DO26560
LUSC
ICGC
PTKTPEPE
DEG_SCF_FBW7_2
0.1389
p.R104C
SIDM01768
Melanoma
GDSC
PTKTPEPE
DEG_SCF_FBW7_2
0.25
p.R104C
ACH-000899
Skin Cancer
CCLE
PTKTPEPE
DEG_SCF_FBW7_2
0.25
p.T108S
ACH-001302
Neuroblastoma
CCLE
PTKTPEPE
DEG_SCF_FBW7_2
0.6005
p.P113L
ACH-001786
Colon/Colorectal Cancer
CCLE
PTKTPEPE
DEG_SCF_FBW7_2
0.6471
Drug responses associated with CCDC115 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTKTPEPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96NT0
Coiled-coil domain-containing protein 115
DEG_SCF_FBW7_2
107:114
PTKTPEPE
FBXW7
0.6666
More...