DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPCST
Uniprot ID:
Q9BYR9
Source protein:
Keratin-associated protein 2-4
Source gene:
KRTAP2-4
Class:
DEG_SCF_FBW7_1
Location:
116:121
E3 ligase:
FBXW7
DEGRON score:
0.8341
ASA_SCORE:
76.4333
COIL:
0.8538
CONS_SCORE:
0.2554
DSS_SCORE:
0.0006
HELIX:
0.0165
FCONS_SCORE:
0.5275
RIG_SCORE:
0.7048
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C123Y
TCGA-AJ-A3OL
UCEC
TCGA
PTPCST
DEG_SCF_FBW7_1
0.2778
p.C123Y
DO43001
UCEC
ICGC
PTPCST
DEG_SCF_FBW7_1
0.2778
p.T121I
TCGA-FF-8043
DLBC
TCGA
PTPCST
DEG_SCF_FBW7_1
0.7078
p.T121I
DO222308
DLBC
ICGC
PTPCST
DEG_SCF_FBW7_1
0.7078
p.C128G
DO222736
BTCA
ICGC
PTPCST
DEG_SCF_FBW7_1
0.1389
p.P118H
DO10324
COAD
ICGC
PTPCST
DEG_SCF_FBW7_1
0.7694
p.R110W
DO227802
COCA
ICGC
PTPCST
DEG_SCF_FBW7_1
0.1667
p.C109G
SIDM00667
Other Sarcomas
GDSC
PTPCST
DEG_SCF_FBW7_1
0.1389
p.R124M
ACH-000399
Lung Cancer
CCLE
PTPCST
DEG_SCF_FBW7_1
0.25
Drug responses associated with KRTAP2-4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPCST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BYR9
Keratin-associated protein 2-4
DEG_SCF_FBW7_1
116:121
PTPCST
FBXW7
0.8341
More...
P0C7H8
Keratin-associated protein 2-3
DEG_SCF_FBW7_1
116:121
PTPCST
FBXW7
0.8341
More...