DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPDKT
Uniprot ID:
Q96SN8
Source protein:
CDK5 regulatory subunit-associated protein 2
Source gene:
CDK5RAP2
Class:
DEG_SCF_FBW7_1
Location:
1000:1005
E3 ligase:
FBXW7
DEGRON score:
0.9583
ASA_SCORE:
98.3667
COIL:
0.775
CONS_SCORE:
0.3186
DSS_SCORE:
0.5679
HELIX:
0.2035
FCONS_SCORE:
0.8304
RIG_SCORE:
0.7152
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1012H
TCGA-AP-A1DP
UCEC
TCGA
PTPDKT
DEG_SCF_FBW7_1
0.1389
p.P1012H
DO42336
UCEC
ICGC
PTPDKT
DEG_SCF_FBW7_1
0.1389
p.A992T
TCGA-BR-4362
STAD
TCGA
PTPDKT
DEG_SCF_FBW7_1
0.1111
p.A992T
DO38336
STAD
ICGC
PTPDKT
DEG_SCF_FBW7_1
0.1111
p.T1005M
TCGA-EO-A22R
UCEC
TCGA
PTPDKT
DEG_SCF_FBW7_1
0.8534
p.T1005M
DO42713
UCEC
ICGC
PTPDKT
DEG_SCF_FBW7_1
0.8534
p.A1015T
TCGA-IB-7651
PAAD
TCGA
PTPDKT
DEG_SCF_FBW7_1
0.0556
p.A1015T
DO46657
PAAD
ICGC
PTPDKT
DEG_SCF_FBW7_1
0.0556
p.P1012L
DO229446
SKCA
ICGC
PTPDKT
DEG_SCF_FBW7_1
0.1389
p.A994T
SIDM00596
Endometrial Carcinoma
GDSC
PTPDKT
DEG_SCF_FBW7_1
0.1667
p.A994T
ACH-001517
Endometrial/Uterine Cancer
CCLE
PTPDKT
DEG_SCF_FBW7_1
0.1667
p.A994T
HEC-1
endometrium
COSMIC
PTPDKT
DEG_SCF_FBW7_1
0.1667
p.L993V
KU-19-19
urinary_tract
COSMIC
PTPDKT
DEG_SCF_FBW7_1
0.1389
Drug responses associated with CDK5RAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPDKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96SN8
CDK5 regulatory subunit-associated protein 2
DEG_SCF_FBW7_1
1000:1005
PTPDKT
FBXW7
0.9583
More...