DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPEPS
Uniprot ID:
P20333
Source protein:
Tumor necrosis factor receptor superfamily member 1B
Source gene:
TNFRSF1B
Class:
DEG_SCF_FBW7_1
Location:
229:234
E3 ligase:
FBXW7
DEGRON score:
0.5671
ASA_SCORE:
94.2667
COIL:
0.9503
CONS_SCORE:
0.323
DSS_SCORE:
0.8055
HELIX:
0.015
FCONS_SCORE:
1.0708
RIG_SCORE:
0.5451
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T222P
TCGA-06-0126
GBM
TCGA
PTPEPS
DEG_SCF_FBW7_1
0.1389
p.T222P
DO11519
GBM
ICGC
PTPEPS
DEG_SCF_FBW7_1
0.1389
p.T227M
TCGA-F4-6809
COAD
TCGA
PTPEPS
DEG_SCF_FBW7_1
0.2778
p.T227M
DO10164
COAD
ICGC
PTPEPS
DEG_SCF_FBW7_1
0.2778
p.E232K
DO229505
LAML
ICGC
PTPEPS
DEG_SCF_FBW7_1
0.591
p.T222R
DO228450
PRAD
ICGC
PTPEPS
DEG_SCF_FBW7_1
0.1389
p.Q225K
SIDM00901
Endometrial Carcinoma
GDSC
PTPEPS
DEG_SCF_FBW7_1
0.2222
p.Q225K
ACH-000940
Endometrial/Uterine Cancer
CCLE
PTPEPS
DEG_SCF_FBW7_1
0.2222
p.Q225K
AN3-CA
endometrium
COSMIC
PTPEPS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with TNFRSF1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPEPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20333
Tumor necrosis factor receptor superfamily member 1B
DEG_SCF_FBW7_1
229:234
PTPEPS
FBXW7
0.5671
More...