DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPETE
Uniprot ID:
P48634
Source protein:
Protein PRRC2A
Source gene:
PRRC2A
Class:
DEG_SCF_FBW7_2
Location:
540:545
E3 ligase:
FBXW7
DEGRON score:
0.957
ASA_SCORE:
106.55
COIL:
0.9553
CONS_SCORE:
0.4199
DSS_SCORE:
0.8842
HELIX:
0.0272
FCONS_SCORE:
0.8668
RIG_SCORE:
0.5082
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A539V
TCGA-BQ-7044
KIRP
TCGA
PTPETE
DEG_SCF_FBW7_2
0.3056
p.A539V
DO20942
KIRP
ICGC
PTPETE
DEG_SCF_FBW7_2
0.3056
p.A550T
TCGA-DU-6392
LGG
TCGA
PTPETE
DEG_SCF_FBW7_2
0.1944
p.A550T
DO22237
LGG
ICGC
PTPETE
DEG_SCF_FBW7_2
0.1944
p.P554S
DO220911
MELA
ICGC
PTPETE
DEG_SCF_FBW7_2
0.0833
p.P554L
SIDM00007
Other Solid Cancers
GDSC
PTPETE
DEG_SCF_FBW7_2
0.0833
p.P554L
ACH-001550
Skin Cancer
CCLE
PTPETE
DEG_SCF_FBW7_2
0.0833
p.P554L
MCC13
skin
COSMIC
PTPETE
DEG_SCF_FBW7_2
0.0833
p.P535A
SIDM00498
Colorectal Carcinoma
GDSC
PTPETE
DEG_SCF_FBW7_2
0.1944
p.P535A
ACH-000970
Colon/Colorectal Cancer
CCLE
PTPETE
DEG_SCF_FBW7_2
0.1944
p.P535A
SNU-C5
large_intestine
COSMIC
PTPETE
DEG_SCF_FBW7_2
0.1944
p.E547K
SIDM00920
Breast Carcinoma
GDSC
PTPETE
DEG_SCF_FBW7_2
0.2778
p.E547K
ACH-000783
Breast Cancer
CCLE
PTPETE
DEG_SCF_FBW7_2
0.2778
p.E547K
CAMA-1
breast
COSMIC
PTPETE
DEG_SCF_FBW7_2
0.2778
p.T541I
SIDM00951
T-Lymphoblastic Leukemia
GDSC
PTPETE
DEG_SCF_FBW7_2
0.7078
p.T541I
ACH-002222
Leukemia
CCLE
PTPETE
DEG_SCF_FBW7_2
0.7078
p.T541I
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPETE
DEG_SCF_FBW7_2
0.7078
p.A539T
SIDM00451
T-Lymphoblastic Leukemia
GDSC
PTPETE
DEG_SCF_FBW7_2
0.3056
p.A539T
ACH-000937
Leukemia
CCLE
PTPETE
DEG_SCF_FBW7_2
0.3056
p.A539T
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
PTPETE
DEG_SCF_FBW7_2
0.3056
Drug responses associated with PRRC2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPETE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
DEG_SCF_FBW7_2
540:545
PTPETE
FBXW7
0.957
More...