DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPGNT
Uniprot ID:
Q13233
Source protein:
Mitogen-activated protein kinase kinase kinase 1
Source gene:
MAP3K1
Class:
DEG_SCF_FBW7_1
Location:
1065:1070
E3 ligase:
FBXW7
DEGRON score:
0.841
ASA_SCORE:
82.5667
COIL:
0.9465
CONS_SCORE:
0.4444
DSS_SCORE:
0.8718
HELIX:
0.03
FCONS_SCORE:
1.0003
RIG_SCORE:
0.4902
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1066A
TCGA-CG-5733
STAD
TCGA
PTPGNT
DEG_SCF_FBW7_1
0.7139
p.T1066A
DO38551
STAD
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.7139
p.K1061R
DO233109
GACA
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.3333
p.G1074E
DO233888
GACA
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.2222
p.D1075N
DO11854
GBM
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.1944
p.P1076S
DO23376
LINC
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.1667
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Drug responses associated with MAP3K1 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PTPGNT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13233
Mitogen-activated protein kinase kinase kinase 1
DEG_SCF_FBW7_1
1065:1070
PTPGNT
FBXW7
0.841
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