DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPGNT
Uniprot ID:
Q13233
Source protein:
Mitogen-activated protein kinase kinase kinase 1
Source gene:
MAP3K1
Class:
DEG_SCF_FBW7_1
Location:
1065:1070
E3 ligase:
FBXW7
DEGRON score:
0.841
ASA_SCORE:
82.5667
COIL:
0.9465
CONS_SCORE:
0.4444
DSS_SCORE:
0.8718
HELIX:
0.03
FCONS_SCORE:
1.0003
RIG_SCORE:
0.4902
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1066A
TCGA-CG-5733
STAD
TCGA
PTPGNT
DEG_SCF_FBW7_1
0.7139
p.T1066A
DO38551
STAD
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.7139
p.K1061R
DO233109
GACA
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.3333
p.G1074E
DO233888
GACA
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.2222
p.D1075N
DO11854
GBM
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.1944
p.P1076S
DO23376
LINC
ICGC
PTPGNT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with MAP3K1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPGNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13233
Mitogen-activated protein kinase kinase kinase 1
DEG_SCF_FBW7_1
1065:1070
PTPGNT
FBXW7
0.841
More...