DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPGST
Uniprot ID:
Q06945
Source protein:
Transcription factor SOX-4
Source gene:
SOX4
Class:
DEG_SCF_FBW7_1
Location:
34:39
E3 ligase:
FBXW7
DEGRON score:
0.9992
ASA_SCORE:
74.5
COIL:
0.9367
CONS_SCORE:
0.5695
DSS_SCORE:
0.6322
HELIX:
0.0227
FCONS_SCORE:
1.134
RIG_SCORE:
0.555
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S41P
TCGA-63-A5MI
LUSC
TCGA
PTPGST
DEG_SCF_FBW7_1
0.2778
p.S41P
DO219147
LUSC
ICGC
PTPGST
DEG_SCF_FBW7_1
0.2778
p.G25C
TCGA-HT-A4DS
LGG
TCGA
PTPGST
DEG_SCF_FBW7_1
0.0833
p.G25C
DO44554
LGG
ICGC
PTPGST
DEG_SCF_FBW7_1
0.0833
p.A24G
DO33028
PACA
ICGC
PTPGST
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SOX4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPGST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q06945
Transcription factor SOX-4
DEG_SCF_FBW7_1
34:39
PTPGST
FBXW7
0.9992
More...