DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPHDS
Uniprot ID:
Q8N1W1
Source protein:
Rho guanine nucleotide exchange factor 28
Source gene:
ARHGEF28
Class:
DEG_SCF_FBW7_1
Location:
1659:1664
E3 ligase:
FBXW7
DEGRON score:
0.8312
ASA_SCORE:
88.15
COIL:
0.917
CONS_SCORE:
0.2905
DSS_SCORE:
0.7931
HELIX:
0.0543
FCONS_SCORE:
1.054
RIG_SCORE:
0.5415
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1659M
TCGA-EO-A22T
UCEC
TCGA
PTPHDS
DEG_SCF_FBW7_1
0.7423
p.T1659M
DO9876
COAD
ICGC
PTPHDS
DEG_SCF_FBW7_1
0.7423
p.T1659M
DO42320
UCEC
ICGC
PTPHDS
DEG_SCF_FBW7_1
0.7423
p.T1659M
SIDM00282
Colorectal Carcinoma
GDSC
PTPHDS
DEG_SCF_FBW7_1
0.7423
p.T1659M
CW-2
large_intestine
COSMIC
PTPHDS
DEG_SCF_FBW7_1
0.7423
p.S1657T
DO225012
BRCA
ICGC
PTPHDS
DEG_SCF_FBW7_1
0.2778
p.P1664L
DO227999
COCA
ICGC
PTPHDS
DEG_SCF_FBW7_1
0.7582
p.P1664L
DO228941
LICA
ICGC
PTPHDS
DEG_SCF_FBW7_1
0.7582
p.P1664L
DO230993
LUSC
ICGC
PTPHDS
DEG_SCF_FBW7_1
0.7582
p.C1656F
DO229032
LICA
ICGC
PTPHDS
DEG_SCF_FBW7_1
0.25
p.S1672T
SIDM00232
Kidney Carcinoma
GDSC
PTPHDS
DEG_SCF_FBW7_1
0.1111
p.S1672T
NCC021
kidney
COSMIC
PTPHDS
DEG_SCF_FBW7_1
0.1111
p.A1673V
ACH-000974
Endometrial/Uterine Cancer
CCLE
PTPHDS
DEG_SCF_FBW7_1
0.0833
p.R1668H
OCUB-M
breast
COSMIC
PTPHDS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with ARHGEF28 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPHDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N1W1
Rho guanine nucleotide exchange factor 28
DEG_SCF_FBW7_1
1659:1664
PTPHDS
FBXW7
0.8312
More...