DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPKYT
Uniprot ID:
A2A3K4
Source protein:
Protein tyrosine phosphatase domain-containing protein 1
Source gene:
PTPDC1
Class:
DEG_SCF_FBW7_1
Location:
33:38
E3 ligase:
FBXW7
DEGRON score:
0.687
ASA_SCORE:
48.45
COIL:
0.7772
CONS_SCORE:
0.3321
DSS_SCORE:
0.4942
HELIX:
0.15
FCONS_SCORE:
1.2054
RIG_SCORE:
0.7623
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M26I
TCGA-17-Z056
LUAD
TCGA
PTPKYT
DEG_SCF_FBW7_1
0.1389
p.M26I
DO225046
BRCA
ICGC
PTPKYT
DEG_SCF_FBW7_1
0.1389
p.R33W
TCGA-IB-7651
PAAD
TCGA
PTPKYT
DEG_SCF_FBW7_1
0.8634
p.R33W
DO46657
PAAD
ICGC
PTPKYT
DEG_SCF_FBW7_1
0.8634
p.R24W
DO225094
BRCA
ICGC
PTPKYT
DEG_SCF_FBW7_1
0.0833
p.G46V
DO225277
BRCA
ICGC
PTPKYT
DEG_SCF_FBW7_1
0.1111
p.Q36L
DO228234
LICA
ICGC
PTPKYT
DEG_SCF_FBW7_1
0.7765
p.R33L
DO23186
LINC
ICGC
PTPKYT
DEG_SCF_FBW7_1
0.8428
p.R39W
SIDM02021
Esophageal Carcinoma
GDSC
PTPKYT
DEG_SCF_FBW7_1
0.3056
p.R39W
SIDM00359
Colorectal Carcinoma
GDSC
PTPKYT
DEG_SCF_FBW7_1
0.3056
p.R39W
ACH-000565
Colon/Colorectal Cancer
CCLE
PTPKYT
DEG_SCF_FBW7_1
0.3056
p.R39W
RCM-1
large_intestine
COSMIC
PTPKYT
DEG_SCF_FBW7_1
0.3056
p.R38Q
SIDM01048
Plasma Cell Myeloma
GDSC
PTPKYT
DEG_SCF_FBW7_1
0.7329
p.R45Q
SNU-1040
large_intestine
COSMIC
PTPKYT
DEG_SCF_FBW7_1
0.1389
Drug responses associated with PTPDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPKYT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2A3K4
Protein tyrosine phosphatase domain-containing protein 1
DEG_SCF_FBW7_1
33:38
PTPKYT
FBXW7
0.687
More...