DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPLSS
Uniprot ID:
O95487
Source protein:
Protein transport protein Sec24B
Source gene:
SEC24B
Class:
DEG_SCF_FBW7_1
Location:
369:374
E3 ligase:
FBXW7
DEGRON score:
0.9895
ASA_SCORE:
77.2667
COIL:
0.9642
CONS_SCORE:
0.2887
DSS_SCORE:
0.8269
HELIX:
0.0213
FCONS_SCORE:
1.2181
RIG_SCORE:
0.5804
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A368S
TCGA-33-4566
LUSC
TCGA
PTPLSS
DEG_SCF_FBW7_1
0.3056
p.A368S
DO26790
LUSC
ICGC
PTPLSS
DEG_SCF_FBW7_1
0.3056
p.E381Q
TCGA-A8-A08R
BRCA
TCGA
PTPLSS
DEG_SCF_FBW7_1
0.1389
p.E381Q
DO1255
BRCA
ICGC
PTPLSS
DEG_SCF_FBW7_1
0.1389
p.S366G
TCGA-D9-A6EC
SKCM
TCGA
PTPLSS
DEG_SCF_FBW7_1
0.25
p.S366G
DO50291
SKCM
ICGC
PTPLSS
DEG_SCF_FBW7_1
0.25
p.G377V
DO228948
LICA
ICGC
PTPLSS
DEG_SCF_FBW7_1
0.25
p.S367F
DO220882
MELA
ICGC
PTPLSS
DEG_SCF_FBW7_1
0.2778
p.A373D
DO35454
PACA
ICGC
PTPLSS
DEG_SCF_FBW7_1
0.7793
p.D381Y
DO37444
SKCM
ICGC
PTPLSS
DEG_SCF_FBW7_1
0.1389
p.R359T
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
PTPLSS
DEG_SCF_FBW7_1
0.0556
p.R359T
ACH-000951
Lung Cancer
CCLE
PTPLSS
DEG_SCF_FBW7_1
0.0556
p.R359T
NCI-H2342
lung
COSMIC
PTPLSS
DEG_SCF_FBW7_1
0.0556
p.N365H
ACH-000289
Brain Cancer
CCLE
PTPLSS
DEG_SCF_FBW7_1
0.2222
p.N365H
ACH-002244
Head and Neck Cancer
CCLE
PTPLSS
DEG_SCF_FBW7_1
0.2222
p.N365H
HO-1-N-1
salivary_gland
COSMIC
PTPLSS
DEG_SCF_FBW7_1
0.2222
p.N363D
AN3-CA
endometrium
COSMIC
PTPLSS
DEG_SCF_FBW7_1
0.1667
p.P368T
A704
kidney
COSMIC
PTPLSS
DEG_SCF_FBW7_1
0.3056
p.P366L
KYSE-410
oesophagus
COSMIC
PTPLSS
DEG_SCF_FBW7_1
0.25
Drug responses associated with SEC24B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPLSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95487
Protein transport protein Sec24B
DEG_SCF_FBW7_1
369:374
PTPLSS
FBXW7
0.9895
More...