DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPLTT
Uniprot ID:
Q9HCJ0
Source protein:
Trinucleotide repeat-containing gene 6C protein
Source gene:
TNRC6C
Class:
DEG_SCF_FBW7_1
Location:
1673:1678
E3 ligase:
FBXW7
DEGRON score:
0.9927
ASA_SCORE:
55.8333
COIL:
0.7667
CONS_SCORE:
0.5421
DSS_SCORE:
0.4571
HELIX:
0.1562
FCONS_SCORE:
0.9859
RIG_SCORE:
0.733
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1666T
DO222842
COCA
ICGC
PTPLTT
DEG_SCF_FBW7_1
0.1389
p.W1669R
DO233113
GACA
ICGC
PTPLTT
DEG_SCF_FBW7_1
0.2222
p.G1675S
DO233867
GACA
ICGC
PTPLTT
DEG_SCF_FBW7_1
0.6993
p.S1664G
DO229221
THCA
ICGC
PTPLTT
DEG_SCF_FBW7_1
0.0833
p.P1672L
DO229245
THCA
ICGC
PTPLTT
DEG_SCF_FBW7_1
0.3056
p.P1672L
SIDM01079
Melanoma
GDSC
PTPLTT
DEG_SCF_FBW7_1
0.3056
p.G1686R
SIDM00121
T-Lymphoblastic Leukemia
GDSC
PTPLTT
DEG_SCF_FBW7_1
0.1111
p.A1671P
SIDM01442
Glioma
GDSC
PTPLTT
DEG_SCF_FBW7_1
0.2778
p.A1667S
Capan-2
pancreas
COSMIC
PTPLTT
DEG_SCF_FBW7_1
0.1667
p.A1667S
RPMI-8402
haematopoietic_and_lymphoid_tissue
COSMIC
PTPLTT
DEG_SCF_FBW7_1
0.1667
p.A1685T
H513
pleura
COSMIC
PTPLTT
DEG_SCF_FBW7_1
0.1389
Drug responses associated with TNRC6C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPLTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SCF_FBW7_1
1673:1678
PTPLTT
FBXW7
0.9927
More...