DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PTPLVT
Uniprot ID:
Q96SM3
Source protein:
Probable carboxypeptidase X1
Source gene:
CPXM1
Class:
DEG_SCF_FBW7_1
Location:
87:92
E3 ligase:
FBXW7
DEGRON score:
0.9286
ASA_SCORE:
99.1333
COIL:
0.9332
CONS_SCORE:
0.3737
DSS_SCORE:
0.499
HELIX:
0.0228
FCONS_SCORE:
1.0652
RIG_SCORE:
0.7503
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K80N
TCGA-AG-3892
READ
TCGA
PTPLVT
DEG_SCF_FBW7_1
0.25
p.K80N
TCGA-HU-8238
STAD
TCGA
PTPLVT
DEG_SCF_FBW7_1
0.25
p.K80N
DO36394
READ
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.25
p.K80N
DO47944
STAD
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.25
p.R86C
TCGA-BR-7715
STAD
TCGA
PTPLVT
DEG_SCF_FBW7_1
0.3056
p.R86C
DO233743
GACA
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.3056
p.R86C
DO38679
STAD
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.3056
p.R86C
SIDM00328
Esophageal Squamous Cell Carcinoma
GDSC
PTPLVT
DEG_SCF_FBW7_1
0.3056
p.R86C
ACH-000605
Esophageal Cancer
CCLE
PTPLVT
DEG_SCF_FBW7_1
0.3056
p.R86C
TE-6
oesophagus
COSMIC
PTPLVT
DEG_SCF_FBW7_1
0.3056
p.P89S
TCGA-D6-6516
HNSC
TCGA
PTPLVT
DEG_SCF_FBW7_1
0.6752
p.P89S
DO15623
HNSC
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.6752
p.V91M
TCGA-DC-6683
READ
TCGA
PTPLVT
DEG_SCF_FBW7_1
0.6097
p.V91M
DO37018
READ
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.6097
p.R79W
DO234366
ESAD
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.1111
p.A93D
DO229041
LICA
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.3056
p.P89L
DO228011
SKCA
ICGC
PTPLVT
DEG_SCF_FBW7_1
0.7582
p.T88I
SIDM00498
Colorectal Carcinoma
GDSC
PTPLVT
DEG_SCF_FBW7_1
0.7078
p.T88I
ACH-000970
Colon/Colorectal Cancer
CCLE
PTPLVT
DEG_SCF_FBW7_1
0.7078
p.T88I
SNU-C5
large_intestine
COSMIC
PTPLVT
DEG_SCF_FBW7_1
0.7078
p.T85S
SIDM00836
Colorectal Carcinoma
GDSC
PTPLVT
DEG_SCF_FBW7_1
0.2778
p.T85S
ACH-000820
Colon/Colorectal Cancer
CCLE
PTPLVT
DEG_SCF_FBW7_1
0.2778
p.T85S
SW403
large_intestine
COSMIC
PTPLVT
DEG_SCF_FBW7_1
0.2778
p.G94R
ACH-001459
Colon/Colorectal Cancer
CCLE
PTPLVT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with CPXM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPLVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96SM3
Probable carboxypeptidase X1
DEG_SCF_FBW7_1
87:92
PTPLVT
FBXW7
0.9286
More...