DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPMDE
Uniprot ID:
P46821
Source protein:
Microtubule-associated protein 1B
Source gene:
MAP1B
Class:
DEG_SCF_FBW7_2
Location:
1130:1135
E3 ligase:
FBXW7
DEGRON score:
0.9124
ASA_SCORE:
95.6667
COIL:
0.8183
CONS_SCORE:
0.5821
DSS_SCORE:
0.8206
HELIX:
0.1322
FCONS_SCORE:
1.0447
RIG_SCORE:
0.6176
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1127Y
TCGA-4Z-AA7M
BLCA
TCGA
PTPMDE
DEG_SCF_FBW7_2
0.25
p.S1127Y
DO218976
BLCA
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.25
p.S1127T
TCGA-AA-3811
COAD
TCGA
PTPMDE
DEG_SCF_FBW7_2
0.25
p.S1127T
DO7962
COAD
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.25
p.E1129K
TCGA-DK-A2I4
BLCA
TCGA
PTPMDE
DEG_SCF_FBW7_2
0.3056
p.E1129K
DO465
BLCA
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.3056
p.P1132H
TCGA-EE-A2GH
SKCM
TCGA
PTPMDE
DEG_SCF_FBW7_2
0.7694
p.P1132H
DO37643
SKCM
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.7694
p.P1139R
TCGA-UY-A8OB
BLCA
TCGA
PTPMDE
DEG_SCF_FBW7_2
0.2222
p.P1139R
DO219037
BLCA
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.2222
p.V1142M
DO230347
COCA
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.1389
p.V1142L
DO229028
LICA
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.1389
p.M1133I
DO220907
MELA
ICGC
PTPMDE
DEG_SCF_FBW7_2
0.6507
p.D1134N
ACH-001568
Skin Cancer
CCLE
PTPMDE
DEG_SCF_FBW7_2
0.5821
Drug responses associated with MAP1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPMDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46821
Microtubule-associated protein 1B
DEG_SCF_FBW7_2
1130:1135
PTPMDE
FBXW7
0.9124
More...