DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPNCS
Uniprot ID:
Q9BZM2
Source protein:
Group IIF secretory phospholipase A2
Source gene:
PLA2G2F
Class:
DEG_SCF_FBW7_1
Location:
141:146
E3 ligase:
FBXW7
DEGRON score:
0.5761
ASA_SCORE:
77.8833
COIL:
0.9328
CONS_SCORE:
0.5068
DSS_SCORE:
0.2173
HELIX:
0.0133
FCONS_SCORE:
1.1276
RIG_SCORE:
0.6971
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C154Y
TCGA-22-5478
LUSC
TCGA
PTPNCS
DEG_SCF_FBW7_1
0.1111
p.C154Y
DO27011
LUSC
ICGC
PTPNCS
DEG_SCF_FBW7_1
0.1111
p.C156Y
TCGA-AX-A2HA
UCEC
TCGA
PTPNCS
DEG_SCF_FBW7_1
0.0556
p.C156Y
DO42504
UCEC
ICGC
PTPNCS
DEG_SCF_FBW7_1
0.0556
p.E134K
TCGA-EB-A431
SKCM
TCGA
PTPNCS
DEG_SCF_FBW7_1
0.1389
p.E134K
DO37671
SKCM
ICGC
PTPNCS
DEG_SCF_FBW7_1
0.1389
p.E138D
TCGA-EY-A1GS
UCEC
TCGA
PTPNCS
DEG_SCF_FBW7_1
0.25
p.E138D
DO43162
UCEC
ICGC
PTPNCS
DEG_SCF_FBW7_1
0.25
p.H131D
TCGA-JW-A5VL
CESC
TCGA
PTPNCS
DEG_SCF_FBW7_1
0.0556
p.H131D
DO49976
CESC
ICGC
PTPNCS
DEG_SCF_FBW7_1
0.0556
p.T147S
TCGA-VQ-A8PT
STAD
TCGA
PTPNCS
DEG_SCF_FBW7_1
0.3056
p.T147S
DO51776
STAD
ICGC
PTPNCS
DEG_SCF_FBW7_1
0.3056
p.E138K
TCGA-WE-A8K6
SKCM
TCGA
PTPNCS
DEG_SCF_FBW7_1
0.25
p.E138K
DO51283
SKCM
ICGC
PTPNCS
DEG_SCF_FBW7_1
0.25
p.I133F
SIDM01175
Other Sarcomas
GDSC
PTPNCS
DEG_SCF_FBW7_1
0.1111
p.I133F
ACH-002309
Sarcoma
CCLE
PTPNCS
DEG_SCF_FBW7_1
0.1111
p.I133F
SW684
soft_tissue
COSMIC
PTPNCS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with PLA2G2F mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPNCS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BZM2
Group IIF secretory phospholipase A2
DEG_SCF_FBW7_1
141:146
PTPNCS
FBXW7
0.5761
More...