DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPNST
Uniprot ID:
Q96SU4
Source protein:
Oxysterol-binding protein-related protein 9
Source gene:
OSBPL9
Class:
DEG_SCF_FBW7_1
Location:
254:259
E3 ligase:
FBXW7
DEGRON score:
0.9832
ASA_SCORE:
79.9
COIL:
0.8662
CONS_SCORE:
0.4193
DSS_SCORE:
0.7889
HELIX:
0.0343
FCONS_SCORE:
1.0198
RIG_SCORE:
0.5043
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q262E
TCGA-17-Z026
LUAD
TCGA
PTPNST
DEG_SCF_FBW7_1
0.25
p.R245C
TCGA-63-A5MM
LUSC
TCGA
PTPNST
DEG_SCF_FBW7_1
0.0833
p.H261L
TCGA-A2-A1FZ
BRCA
TCGA
PTPNST
DEG_SCF_FBW7_1
0.7222
p.P253S
TCGA-XF-A9ST
BLCA
TCGA
PTPNST
DEG_SCF_FBW7_1
0.3056
p.L253V
KYSE-410
oesophagus
COSMIC
PTPNST
DEG_SCF_FBW7_1
0.3056
p.L257V
KYSE-410
oesophagus
COSMIC
PTPNST
DEG_SCF_FBW7_1
0.6765
p.H246P
EM-2
haematopoietic_and_lymphoid_tissue
COSMIC
PTPNST
DEG_SCF_FBW7_1
0.1111
Drug responses associated with OSBPL9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPNST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96SU4
Oxysterol-binding protein-related protein 9
DEG_SCF_FBW7_1
254:259
PTPNST
FBXW7
0.9832
More...