DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPQFS
Uniprot ID:
Q9P2P6
Source protein:
StAR-related lipid transfer protein 9
Source gene:
STARD9
Class:
DEG_SCF_FBW7_1
Location:
3322:3327
E3 ligase:
FBXW7
DEGRON score:
0.9623
ASA_SCORE:
79.4333
COIL:
0.8143
CONS_SCORE:
0.5193
DSS_SCORE:
0.6584
HELIX:
0.0262
FCONS_SCORE:
0.9295
RIG_SCORE:
0.6264
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V3328F
TCGA-A2-A25A
BRCA
TCGA
PTPQFS
DEG_SCF_FBW7_1
0.3056
p.V3328F
DO3101
BRCA
ICGC
PTPQFS
DEG_SCF_FBW7_1
0.3056
p.S3334Y
TCGA-B5-A0JY
UCEC
TCGA
PTPQFS
DEG_SCF_FBW7_1
0.1389
p.S3334Y
DO43041
UCEC
ICGC
PTPQFS
DEG_SCF_FBW7_1
0.1389
p.G3330S
DO234182
ESAD
ICGC
PTPQFS
DEG_SCF_FBW7_1
0.25
p.S3318F
DO23735
LUAD
ICGC
PTPQFS
DEG_SCF_FBW7_1
0.2222
p.V3328L
ACH-000582
Skin Cancer
CCLE
PTPQFS
DEG_SCF_FBW7_1
0.3056
p.R3333H
ACH-001142
Non-Cancerous
CCLE
PTPQFS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with STARD9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPQFS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2P6
StAR-related lipid transfer protein 9
DEG_SCF_FBW7_1
3322:3327
PTPQFS
FBXW7
0.9623
More...