DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPQQS
Uniprot ID:
Q8IYB3
Source protein:
Serine/arginine repetitive matrix protein 1
Source gene:
SRRM1
Class:
DEG_SCF_FBW7_1
Location:
415:420
E3 ligase:
FBXW7
DEGRON score:
0.9953
ASA_SCORE:
117.9
COIL:
0.9565
CONS_SCORE:
0.365
DSS_SCORE:
0.9431
HELIX:
0.0365
FCONS_SCORE:
1.0803
RIG_SCORE:
0.5266
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T416I
TCGA-33-A4WN
LUSC
TCGA
PTPQQS
DEG_SCF_FBW7_1
0.8189
p.T416I
DO219121
LUSC
ICGC
PTPQQS
DEG_SCF_FBW7_1
0.8189
p.K410R
TCGA-AG-A008
READ
TCGA
PTPQQS
DEG_SCF_FBW7_1
0.3056
p.R412W
TCGA-EO-A22R
UCEC
TCGA
PTPQQS
DEG_SCF_FBW7_1
0.25
p.P427S
DO229453
SKCA
ICGC
PTPQQS
DEG_SCF_FBW7_1
0.1389
p.P407S
DO229491
SKCA
ICGC
PTPQQS
DEG_SCF_FBW7_1
0.1111
p.R407W
DO42713
UCEC
ICGC
PTPQQS
DEG_SCF_FBW7_1
0.1111
p.R427H
SIDM01006
Plasma Cell Myeloma
GDSC
PTPQQS
DEG_SCF_FBW7_1
0.1389
p.R427H
SIDM00981
B-Cell Non-Hodgkin's Lymphoma
GDSC
PTPQQS
DEG_SCF_FBW7_1
0.1389
p.R427H
SIDM01778
B-Cell Non-Hodgkin's Lymphoma
GDSC
PTPQQS
DEG_SCF_FBW7_1
0.1389
p.V428I
SIDM01007
T-Lymphoblastic Leukemia
GDSC
PTPQQS
DEG_SCF_FBW7_1
0.1111
p.A405V
SIDM00847
Rhabdomyosarcoma
GDSC
PTPQQS
DEG_SCF_FBW7_1
0.0556
p.A405V
ACH-000169
Sarcoma
CCLE
PTPQQS
DEG_SCF_FBW7_1
0.0556
p.A405V
RD
soft_tissue
COSMIC
PTPQQS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SRRM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPQQS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SCF_FBW7_1
415:420
PTPQQS
FBXW7
0.9953
More...