DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPQYS
Uniprot ID:
Q99795
Source protein:
Cell surface A33 antigen
Source gene:
GPA33
Class:
DEG_SCF_FBW7_1
Location:
169:174
E3 ligase:
FBXW7
DEGRON score:
0.6815
ASA_SCORE:
51.5
COIL:
0.4367
CONS_SCORE:
0.7578
DSS_SCORE:
0.4693
HELIX:
0.0082
FCONS_SCORE:
1.198
RIG_SCORE:
0.7133
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P171H
TCGA-17-Z028
LUAD
TCGA
PTPQYS
DEG_SCF_FBW7_1
0.7694
p.W175L
TCGA-61-1730
OV
TCGA
PTPQYS
DEG_SCF_FBW7_1
0.3056
p.W175L
DO31859
OV
ICGC
PTPQYS
DEG_SCF_FBW7_1
0.3056
p.S168L
TCGA-63-7020
LUSC
TCGA
PTPQYS
DEG_SCF_FBW7_1
0.3056
p.S168L
DO27596
LUSC
ICGC
PTPQYS
DEG_SCF_FBW7_1
0.3056
p.E166K
TCGA-FW-A3R5
SKCM
TCGA
PTPQYS
DEG_SCF_FBW7_1
0.25
p.E166K
DO220886
MELA
ICGC
PTPQYS
DEG_SCF_FBW7_1
0.25
p.E166K
DO37406
SKCM
ICGC
PTPQYS
DEG_SCF_FBW7_1
0.25
p.P171S
TCGA-GN-A266
SKCM
TCGA
PTPQYS
DEG_SCF_FBW7_1
0.6752
p.P171S
DO37432
SKCM
ICGC
PTPQYS
DEG_SCF_FBW7_1
0.6752
p.T170N
DO229028
LICA
ICGC
PTPQYS
DEG_SCF_FBW7_1
0.7055
p.T161N
SIDM00863
Burkitt's Lymphoma
GDSC
PTPQYS
DEG_SCF_FBW7_1
0.1111
p.K176R
SIDM00850
Gastric Carcinoma
GDSC
PTPQYS
DEG_SCF_FBW7_1
0.2778
p.K176R
ACH-000880
Gastric Cancer
CCLE
PTPQYS
DEG_SCF_FBW7_1
0.2778
p.K176R
AGS
stomach
COSMIC
PTPQYS
DEG_SCF_FBW7_1
0.2778
p.E184D
ACH-000450
Skin Cancer
CCLE
PTPQYS
DEG_SCF_FBW7_1
0.0556
p.T161P
ACH-000722
Colon/Colorectal Cancer
CCLE
PTPQYS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with GPA33 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPQYS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99795
Cell surface A33 antigen
DEG_SCF_FBW7_1
169:174
PTPQYS
FBXW7
0.6815
More...