DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PTPRDS
Uniprot ID:
Q8TF76
Source protein:
Serine/threonine-protein kinase haspin
Source gene:
HASPIN
Class:
DEG_SCF_FBW7_1
Location:
180:185
E3 ligase:
FBXW7
DEGRON score:
0.8649
ASA_SCORE:
80.9167
COIL:
0.7622
CONS_SCORE:
0.2471
DSS_SCORE:
0.4014
HELIX:
0.2185
FCONS_SCORE:
0.973
RIG_SCORE:
0.6734
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P180L
SIDM00946
T-Lymphoblastic Leukemia
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.6471
p.P180L
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
PTPRDS
DEG_SCF_FBW7_1
0.6471
p.I189T
SIDM00355
Non-Small Cell Lung Carcinoma
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
SIDM00235
Kidney Carcinoma
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
SIDM00271
Gastric Carcinoma
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
SIDM01622
Breast Carcinoma
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
SIDM01320
Pancreatic Carcinoma
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
SIDM01685
B-Lymphoblastic Leukemia
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
RCC10RGB
kidney
COSMIC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
MKN1
stomach
COSMIC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.I189T
RERF-LC-MS
lung
COSMIC
PTPRDS
DEG_SCF_FBW7_1
0.2222
p.S179T
SIDM01196
Hepatocellular Carcinoma
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.75
p.S179T
SNU-475
liver
COSMIC
PTPRDS
DEG_SCF_FBW7_1
0.75
p.S174L
SIDM01387
Small Cell Lung Carcinoma
GDSC
PTPRDS
DEG_SCF_FBW7_1
0.6111
Drug responses associated with HASPIN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPRDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TF76
Serine/threonine-protein kinase haspin
DEG_SCF_FBW7_1
180:185
PTPRDS
FBXW7
0.8649
More...