DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPRLT
Uniprot ID:
Q9UJY5
Source protein:
ADP-ribosylation factor-binding protein GGA1
Source gene:
GGA1
Class:
DEG_SCF_FBW7_1
Location:
449:454
E3 ligase:
FBXW7
DEGRON score:
0.9982
ASA_SCORE:
80.6833
COIL:
0.8597
CONS_SCORE:
0.2849
DSS_SCORE:
0.6315
HELIX:
0.088
FCONS_SCORE:
1.0603
RIG_SCORE:
0.7293
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P451S
TCGA-FR-A7U9
SKCM
TCGA
PTPRLT
DEG_SCF_FBW7_1
0.6752
p.H444R
DO10443
COAD
ICGC
PTPRLT
DEG_SCF_FBW7_1
0.1944
p.P454L
DO227985
COCA
ICGC
PTPRLT
DEG_SCF_FBW7_1
0.7582
p.P454L
DO48174
UCEC
ICGC
PTPRLT
DEG_SCF_FBW7_1
0.7582
p.P454L
DO43306
UCEC
ICGC
PTPRLT
DEG_SCF_FBW7_1
0.7582
p.S441I
DO228974
LICA
ICGC
PTPRLT
DEG_SCF_FBW7_1
0.1111
p.R460L
DO231862
LINC
ICGC
PTPRLT
DEG_SCF_FBW7_1
0.1667
p.P453S
DO41331
UCEC
ICGC
PTPRLT
DEG_SCF_FBW7_1
0.6752
p.R460W
SIDM00602
Gastric Carcinoma
GDSC
PTPRLT
DEG_SCF_FBW7_1
0.1667
p.R460W
IM-95
stomach
COSMIC
PTPRLT
DEG_SCF_FBW7_1
0.1667
p.S463G
ACH-000345
Neuroblastoma
CCLE
PTPRLT
DEG_SCF_FBW7_1
0.0833
p.S463G
ACH-002163
Breast Cancer
CCLE
PTPRLT
DEG_SCF_FBW7_1
0.0833
p.S463G
KP-N-RT-BM-1
autonomic_ganglia
COSMIC
PTPRLT
DEG_SCF_FBW7_1
0.0833
p.S463G
MRK-nu-1
breast
COSMIC
PTPRLT
DEG_SCF_FBW7_1
0.0833
p.R443W
ACH-000919
Gastric Cancer
CCLE
PTPRLT
DEG_SCF_FBW7_1
0.1667
p.R443W
IM-95
stomach
COSMIC
PTPRLT
DEG_SCF_FBW7_1
0.1667
p.M460V
EN
endometrium
COSMIC
PTPRLT
DEG_SCF_FBW7_1
0.1667
p.R451H
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PTPRLT
DEG_SCF_FBW7_1
0.8244
p.R451H
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPRLT
DEG_SCF_FBW7_1
0.8244
Drug responses associated with GGA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPRLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UJY5
ADP-ribosylation factor-binding protein GGA1
DEG_SCF_FBW7_1
449:454
PTPRLT
FBXW7
0.9982
More...