DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPRVT
Uniprot ID:
Q9H156
Source protein:
SLIT and NTRK-like protein 2
Source gene:
SLITRK2
Class:
DEG_SCF_FBW7_1
Location:
311:316
E3 ligase:
FBXW7
DEGRON score:
0.9936
ASA_SCORE:
66.3167
COIL:
0.8207
CONS_SCORE:
0.753
DSS_SCORE:
0.7673
HELIX:
0.0467
FCONS_SCORE:
1.1013
RIG_SCORE:
0.6684
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K306T
TCGA-2E-A9G8
UCEC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.K306T
DO219763
UCEC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.P304T
TCGA-44-7661
LUAD
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.P304T
DO23602
LUAD
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.P304T
SIDM00769
Non-Small Cell Lung Carcinoma
GDSC
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.P304T
ACH-000733
Lung Cancer
CCLE
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.P304T
NCI-H1838
lung
COSMIC
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.P311T
TCGA-44-7671
LUAD
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.7031
p.P311T
DO25252
LUAD
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.7031
p.P311A
TCGA-50-5941
LUAD
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.7503
p.P311A
DO25528
LUAD
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.7503
p.S302N
TCGA-AA-3672
COAD
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.5278
p.S302N
DO9010
COAD
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.5278
p.R310C
TCGA-AP-A051
UCEC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310C
DO222650
BTCA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310C
DO222762
COCA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310C
DO222868
MELA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310C
DO42673
UCEC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310C
SIDM00534
Colorectal Carcinoma
GDSC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310C
ACH-000986
Colon/Colorectal Cancer
CCLE
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310C
HT-115
large_intestine
COSMIC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.P326S
TCGA-AX-A1C9
UCEC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.0556
p.P326S
TCGA-ZH-A8Y2
CHOL
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.0556
p.P326S
DO43098
UCEC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.0556
p.K319N
TCGA-AX-A2HC
UCEC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.3611
p.K319N
DO41572
UCEC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3611
p.R314Q
TCGA-B5-A0JY
UCEC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.6218
p.R314Q
TCGA-EO-A22R
UCEC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.6218
p.R314Q
DO43041
UCEC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.6218
p.R314Q
DO42713
UCEC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.6218
p.R303Q
TCGA-B6-A0I9
BRCA
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.1111
p.R303Q
TCGA-BR-4368
STAD
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.1111
p.R303Q
DO5863
BRCA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.1111
p.R303Q
DO36969
READ
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.1111
p.R303Q
DO38715
STAD
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.1111
p.R310H
TCGA-D6-A6EN
HNSC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310H
DO233747
GACA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.R310H
DO223266
HNSC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.3056
p.P304L
TCGA-VS-A9UI
CESC
TCGA
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.P304L
DO219734
CESC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.V315M
DO223066
ESCA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.6097
p.R308K
DO233281
GACA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.25
p.P304S
DO23324
LINC
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.1389
p.D320E
DO232832
NACA
ICGC
PTPRVT
DEG_SCF_FBW7_1
0.2222
p.S318L
SIDM00017
Squamous Cell Lung Carcinoma
GDSC
PTPRVT
DEG_SCF_FBW7_1
0.2778
p.S318L
ACH-000912
Lung Cancer
CCLE
PTPRVT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with SLITRK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPRVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H156
SLIT and NTRK-like protein 2
DEG_SCF_FBW7_1
311:316
PTPRVT
FBXW7
0.9936
More...